RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 ITGB1P05556 798 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 POLR2BP30876 1174 aaKnown RBP14.24□□□□□ -0.13
SEC61B-202ENST00000481573 AP3M2P53677 418 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 FANCCQ00597 558 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 MYL7Q01449 175 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 UPP1Q16831 310 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 EPC2Q52LR7 807 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 KRT39Q6A163 491 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 TMEM173Q86WV6 379 aaPredicted RBP14.24□□□□□ -0.13
SEC61B-202ENST00000481573 LMO3Q8TAP4 145 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 BCL7CQ8WUZ0 217 aaPredicted RBP14.24□□□□□ -0.13
SEC61B-202ENST00000481573 ELMO3Q96BJ8 720 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 NAP1L5Q96NT1 182 aaPredicted RBP14.24□□□□□ -0.13
SEC61B-202ENST00000481573 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 MARCH5Q9NX47 278 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 ITGA11Q9UKX5 1188 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 COQ4Q9Y3A0 265 aa14.24□□□□□ -0.13
SEC61B-202ENST00000481573 A0A1B0GTH6 734 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.23□□□□□ -0.13
SEC61B-202ENST00000481573 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.23□□□□□ -0.13
SEC61B-202ENST00000481573 LINC01553A4QN01 128 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 LGALS16A8MUM7 142 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 PODXLO00592 558 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 TEX33O43247 280 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 STX10O60499 249 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 KIF4AO95239 1232 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 HLA-DRAP01903 254 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 GALTP07902 379 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 BCAR1P56945 870 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 MYL6P60660 151 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 TPM4P67936 248 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 BIRC3Q13489 604 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 FIBCD1Q8N539 461 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 CLP1Q92989 425 aaKnown RBP14.23□□□□□ -0.13
SEC61B-202ENST00000481573 FAM193BQ96PV7 902 aaPredicted RBP14.23□□□□□ -0.13
SEC61B-202ENST00000481573 TMEM175Q9BSA9 504 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 AGAP1Q9UPQ3 857 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 PCDHA11Q9Y5I1 949 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 CHD7Q9P2D1 2997 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 PTPRDP23468 1912 aa14.23□□□□□ -0.13
SEC61B-202ENST00000481573 FSD2A1L4K1 749 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 NT5C1B-RDH14C9J2C7 533 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 NRP1O14786 923 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 SPTLC1O15269 473 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 P4HA2O15460 535 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 CA3P07451 260 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 KRT19P08727 400 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 RPL9P32969 192 aaKnown RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 OR1G1P47890 313 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 KCNMA1Q12791 1236 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 NCOA4Q13772 614 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 PTPN21Q16825 1174 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 DPY19L2P1Q6NXN4 242 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 COLGALT1Q8NBJ5 622 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 FBXL13Q8NEE6 735 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 ANKRD20A12PQ8NF67 263 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 HASPINQ8TF76 798 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 UROC1Q96N76 676 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 CRACR2AQ9BSW2 395 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 PI4K2AQ9BTU6 479 aa14.22□□□□□ -0.13
SEC61B-202ENST00000481573 APOBEC3GQ9HC16 384 aaKnown RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 PRG3Q9Y2Y8 225 aaPredicted RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.22□□□□□ -0.13
SEC61B-202ENST00000481573 PLXNA3P51805 1871 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 GTPBP10A4D1E9 387 aaKnown RBP14.21□□□□□ -0.13
SEC61B-202ENST00000481573 TMEM189-UBE2V1I3L0A0 370 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 PHACTR2O75167 634 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 EFEMP2O95967 443 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.13
SEC61B-202ENST00000481573 SERPINC1P01008 464 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 LAG3P18627 525 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 PIK3CAP42336 1068 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 AARSP49588 968 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEC61B-202ENST00000481573 RBP5P82980 135 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 APBA1Q02410 837 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 NR1I3Q14994 352 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 SPOPLQ6IQ16 392 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 KCNT2Q6UVM3 1135 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 SLC39A11Q8N1S5 342 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 LRRC52Q8N7C0 313 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 DDX27Q96GQ7 796 aaKnown RBP14.21□□□□□ -0.13
SEC61B-202ENST00000481573 VN1R3Q9BXE9 311 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 XPO4Q9C0E2 1151 aaKnown RBP14.21□□□□□ -0.13
SEC61B-202ENST00000481573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEC61B-202ENST00000481573 RAB20Q9NX57 234 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 IFNKQ9P0W0 207 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 MYH10P35580 1976 aa14.21□□□□□ -0.13
SEC61B-202ENST00000481573 TRANK1O15050 2925 aa14.21□□□□□ -0.14
SEC61B-202ENST00000481573 SPTBN5Q9NRC6 3674 aaKnown RBP14.2□□□□□ -0.14
SEC61B-202ENST00000481573 MTCL1Q9Y4B5 1905 aaKnown RBP14.2□□□□□ -0.14
SEC61B-202ENST00000481573 PES1O00541 588 aaKnown RBP14.2□□□□□ -0.14
SEC61B-202ENST00000481573 B3GAT3O94766 335 aa14.2□□□□□ -0.14
SEC61B-202ENST00000481573 STAU1O95793 577 aaKnown RBP14.2□□□□□ -0.14
SEC61B-202ENST00000481573 SLC9A1P19634 815 aa14.2□□□□□ -0.14
SEC61B-202ENST00000481573 BRCC3P46736 316 aa14.2□□□□□ -0.14
SEC61B-202ENST00000481573 KLK7P49862 253 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms