RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 PER2O15055 1255 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 CETN3O15182 167 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 MAPK13O15264 365 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 PAX3P23760 479 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 PSMC2P35998 433 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 BRCC3P46736 316 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 NRIP1P48552 1158 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 FKBP3Q00688 224 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 HYAL1Q12794 435 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 KIAA0319Q5VV43 1072 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 LMBRD2Q68DH5 695 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 ANKRD40Q6AI12 368 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 USP37Q86T82 979 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 GPR65Q8IYL9 337 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 NELFBQ8WX92 580 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 POP1Q99575 1024 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 CDCA3Q99618 268 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 CGRRF1Q99675 332 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 EMILIN2Q9BXX0 1053 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 IGFLR1Q9H665 355 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 ITGA11Q9UKX5 1188 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 CTNND2Q9UQB3 1225 aa16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-206ENST00000481077 PRUNE2Q8WUY3 3088 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 PPEF2O14830 753 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 AKAP3O75969 853 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 ITGB3P05106 788 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 FGFR3P22607 806 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 POLR2BP30876 1174 aaKnown RBP16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 PMS1P54277 932 aaKnown RBP16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 LILRA4P59901 499 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 CREMQ03060 361 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 PAK1Q13153 545 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 RTP2Q5QGT7 225 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 PDXDC1Q6P996 788 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 FAM186BQ8IYM0 893 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 C1orf127Q8N9H9 656 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 MLKLQ8NB16 471 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 OR5B17Q8NGF7 314 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 EEF2KMTQ96G04 330 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 ZNF560Q96MR9 790 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 AGAP1Q9UPQ3 857 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
CNKSR1-206ENST00000481077 SYN3O14994 580 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 LILRB3O75022 631 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 KRT19P08727 400 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 CNPP09543 421 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 EPB41P11171 864 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 KRT13P13646 458 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 PTMSP20962 102 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 TKTP29401 623 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 GTF2F1P35269 517 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 PNPLA4P41247 253 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 AARSP49588 968 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 RBP5P82980 135 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 DUSP6Q16828 381 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 CCDC183Q5T5S1 534 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 DSTYKQ6XUX3 929 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 INTS8Q75QN2 995 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 TMC2Q8TDI7 906 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 FAM84AQ96KN4 292 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
CNKSR1-206ENST00000481077 XIRP2A4UGR9 3374 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 ARHGEF37A1IGU5 675 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 LRRIQ3A6PVS8 624 aaPredicted RBP16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 KLRC2P26717 231 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 TAF6P49848 677 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 VAMP7P51809 220 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 AP3M2P53677 418 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 CLDN10P78369 228 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PSMD5Q16401 504 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 SV2CQ496J9 727 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 FOXR2Q6PJQ5 311 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PRSS55Q6UWB4 352 aaPredicted RBP16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 EP400NLQ6ZTU2 488 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 ANKS3Q6ZW76 656 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 TRAPPC11Q7Z392 1133 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 ZC3H3Q8IXZ2 948 aaKnown RBP16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 LRRC52Q8N7C0 313 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 EFHBQ8N7U6 833 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 APPL2Q8NEU8 664 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PLEKHO2Q8TD55 490 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PIK3R5Q8WYR1 880 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 HLA-CQ95604 372 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 KLHL5Q96PQ7 755 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 GZF1Q9H116 711 aaPredicted RBP16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 RXFP1Q9HBX9 757 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 CLDND1Q9NY35 253 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 FNIP2Q9P278 1114 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
CNKSR1-206ENST00000481077 PCDHB8Q9UN66 801 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms