RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 PTPN12Q05209 780 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 BLMHQ13867 455 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 HECTD3Q5T447 861 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TYW1BQ6NUM6 668 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TXNDC11Q6PKC3 985 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ATG14Q6ZNE5 492 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CSRNP2Q9H175 543 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 DCLRE1BQ9H816 532 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CCDC177Q9NQR7 707 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 FAM153AQ9UHL3 310 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 USP15Q9Y4E8 981 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PCDHGC5Q9Y5F6 944 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 V9GYQ6 96 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 UBN2Q6ZU65 1347 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 WDR19Q8NEZ3 1342 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CLRN2A0PK11 232 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 F8W031 263 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SMNDC1O75940 238 aaKnown RBP eCLIP4.77□□□□□ -1.653e-7■■■□□ 16.7
GPCPD1-205ENST00000481038 CCDC130P13994 396 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TARSP26639 723 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 NAA20P61599 178 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PHC1P78364 1004 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SSX2Q16385 188 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GPATCH4Q5T3I0 446 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PYHIN1Q6K0P9 492 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 KIAA0408Q6ZU52 694 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 MARK2Q7KZI7 788 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 POLNQ7Z5Q5 900 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 HNRNPLLQ8WVV9 542 aaKnown RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 OTULINQ96BN8 352 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 FUT8Q9BYC5 575 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SP140LQ9H930 580 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 C17orf75Q9HAS0 396 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 COX16Q9P0S2 106 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 WDR35Q9P2L0 1181 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 RPH3AQ9Y2J0 694 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GRXCR2A6NFK2 248 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SPTLC2O15270 562 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 CRYZL1O95825 349 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ATF6P18850 670 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 PDHA2P29803 388 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ZAP70P43403 619 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 AARSP49588 968 aaKnown RBP eCLIP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TOP3AQ13472 1001 aaPredicted RBP4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 ZMYM1Q5SVZ6 1142 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SYCP2LQ5T4T6 812 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SYCE1Q8N0S2 351 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 BORCS5Q969J3 196 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 FAXDC2Q96IV6 333 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 KLHL32Q96NJ5 620 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 FERD3LQ96RJ6 166 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 GGT7Q9UJ14 662 aa4.77□□□□□ -1.65
GPCPD1-205ENST00000481038 SLIT2O94813 1529 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 LMO7Q8WWI1 1683 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 H3BQF6 201 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 E2F3O00716 465 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 ENC1O14682 589 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 PLCG1P19174 1290 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 VSNL1P62760 191 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 IL1RL1Q01638 556 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 CYP4A11Q02928 519 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 TNFAIP2Q03169 654 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 RUNX1T1Q06455 604 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 TCP11X2Q5H9J9 407 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 CYP4A22Q5TCH4 519 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 TBC1D9BQ66K14 1250 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 EXOC3L1Q86VI1 746 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 GSPT2Q8IYD1 628 aaKnown RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 XXYLT1Q8NBI6 393 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 LINC00116Q8NCU8 138 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 ZNF594Q96JF6 807 aaPredicted RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 UPF3AQ9H1J1 476 aaKnown RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 KCNF1Q9H3M0 494 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 SRP68Q9UHB9 627 aaKnown RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 RWDD2AQ9UIY3 292 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 PNMA3Q9UL41 463 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 COQ6Q9Y2Z9 468 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 PHF20L1A8MW92 1017 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 NCAM2O15394 837 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 CCDC22O60826 627 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 MAGEA1P43355 309 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 AKIRIN2Q53H80 203 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 ZCCHC7Q8N3Z6 543 aaKnown RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 NECAB1Q8N987 351 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 SLC43A3Q8NBI5 491 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 OR8K1Q8NGG5 319 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 ART5Q96L15 291 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 RETREG1Q9H6L5 497 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 RGS17Q9UGC6 210 aaPredicted RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 NFU1Q9UMS0 254 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 SIK3Q9Y2K2 1263 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 ADCY9O60503 1353 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 MED23Q9ULK4 1368 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 KDM6AO15550 1401 aaPredicted RBP4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 ATRNO75882 1429 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 PIK3C2AO00443 1686 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 CAMTA1Q9Y6Y1 1673 aa4.76□□□□□ -1.65
GPCPD1-205ENST00000481038 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms