RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 MGAT5Q09328 741 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 ZC2HC1CQ53FD0 456 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 KIAA0907Q7Z7F0 614 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-203ENST00000480484 GPBP1Q86WP2 473 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 CCDC65Q8IXS2 484 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 PIGOQ8TEQ8 1089 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 TRIM4Q9C037 500 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 GCNT4Q9P109 453 aa10.79□□□□□ -0.68
COMMD4-203ENST00000480484 PLIN4Q96Q06 1357 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 GJB6O95452 261 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 BRAFP15056 766 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 NAT1P18440 290 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 CLK1P49759 484 aaKnown RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 MRPS35P82673 323 aaKnown RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 ROR2Q01974 943 aaKnown RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 DHX34Q14147 1143 aaKnown RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 ASPRV1Q53RT3 343 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 ECHDC2Q86YB7 292 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 MFN1Q8IWA4 741 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 LNX1Q8TBB1 728 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 KRT35Q92764 455 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 CNOT7Q9UIV1 285 aaKnown RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 PCDHA2Q9Y5H9 948 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 PFASO15067 1338 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 A0A1B0GVG6 124 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 DDTLA6NHG4 134 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 O00370 1275 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 RTN3O95197 1032 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 KLC1Q07866 573 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 LAMB3Q13751 1172 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 CCDC137Q6PK04 289 aaKnown RBP10.78□□□□□ -0.68
COMMD4-203ENST00000480484 CROCCP2Q86T23 111 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 DEPDC7Q96QD5 511 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 MYLK2Q9H1R3 596 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 COG5Q9UP83 839 aa10.78□□□□□ -0.68
COMMD4-203ENST00000480484 G3V3G9 751 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 ENTPD5O75356 428 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 PIAS1O75925 651 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 TRIM49P0CI25 452 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 TRIM49CP0CI26 452 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 CNGA1P29973 690 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 ETFBP38117 255 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 NT5C2P49902 561 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 UBXN2AP68543 259 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 WASHC5Q12768 1159 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 MPP2Q14168 576 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 VSTM1Q6UX27 236 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 RFFLQ8WZ73 363 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 MOV10L1Q9BXT6 1211 aaKnown RBP10.77□□□□□ -0.68
COMMD4-203ENST00000480484 PITPNM3Q9BZ71 974 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 CARD9Q9H257 536 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 TAOK3Q9H2K8 898 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 KCTD10Q9H3F6 313 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 TXLNGQ9NUQ3 528 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 MRGBPQ9NV56 204 aa10.77□□□□□ -0.68
COMMD4-203ENST00000480484 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PEX11AO75192 247 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 GM2AP17900 193 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 GNAZP19086 355 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 ATICP31939 592 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 STAT1P42224 750 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 FXR2P51116 673 aaKnown RBP eCLIP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 C2CD6Q53TS8 623 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 TTC27Q6P3X3 843 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 KRT77Q7Z794 578 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 SRRM1Q8IYB3 904 aaKnown RBP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 DNAJC9Q8WXX5 260 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PHF2O75151 1096 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PYGLP06737 847 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 MMP10P09238 476 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 TPBGLP0DKB5 382 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 RARGP13631 454 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 ATP6V1C1P21283 382 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 SMARCA1P28370 1054 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 EPHB2P29323 1055 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 RANBP1P43487 201 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CRKP46108 304 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PEX5P50542 639 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CCNG1P51959 295 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 RBM5P52756 815 aaKnown RBP eCLIP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 DAB2P98082 770 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CALCOCO2Q13137 446 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CCDC6Q16204 474 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 BTNL9Q6UXG8 535 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 SFR1Q86XK3 245 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 PRELID2Q8N945 189 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 FAM13CQ8NE31 585 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 UCMAQ8WVF2 138 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CKAP2Q8WWK9 683 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 EIF2AK1Q9BQI3 630 aaKnown RBP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 THAP2Q9H0W7 228 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CDC42EP4Q9H3Q1 356 aaKnown RBP10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CYLDQ9NQC7 956 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
COMMD4-203ENST00000480484 NKIRAS1Q9NYS0 192 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms