RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MAPK13O15264 365 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-212ENST00000480461 CST3P01034 146 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-212ENST00000480461 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
TRA2B-212ENST00000480461 OR1G1P47890 313 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 CAMK1Q14012 370 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 TMEM132DQ14C87 1099 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 STX1AQ16623 288 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 ANO6Q4KMQ2 910 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 EP400NLQ6ZTU2 488 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 FAM186BQ8IYM0 893 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 CSGALNACT2Q8N6G5 542 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 TSG101Q99816 390 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 ALG13Q9NP73 1137 aaKnown RBP13.24□□□□□ -0.29
TRA2B-212ENST00000480461 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 ANO10Q9NW15 660 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 DERAQ9Y315 318 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
TRA2B-212ENST00000480461 TRIP11Q15643 1979 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 MYO15AQ9UKN7 3530 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 ANO9A1A5B4 782 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 BICDL2A1A5D9 508 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 H3BNC9 293 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 GRM6O15303 877 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 C4BPAP04003 597 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 DLATP10515 647 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 CYP3A5P20815 502 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 LRPAP1P30533 357 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 ALDH7A1P49419 539 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 VAMP7P51809 220 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 PTPN5P54829 565 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 TFAMQ00059 246 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 PPP3CAQ08209 521 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 NCAPHQ15003 741 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 CT47A1Q5JQC4 288 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 SPOUT1Q5T280 376 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 C1orf127Q8N9H9 656 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 ENOX1Q8TC92 643 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 TMC2Q8TDI7 906 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 RSPH1Q8WYR4 309 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 IGSF21Q96ID5 467 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 CEP63Q96MT8 703 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 SAMD11Q96NU1 681 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 FAM193BQ96PV7 902 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 TSPAN18Q96SJ8 248 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 HSD3B7Q9H2F3 369 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 DPP3Q9NY33 737 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 CLDND1Q9NY35 253 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 FRMD4BQ9Y2L6 1034 aa13.23□□□□□ -0.29
TRA2B-212ENST00000480461 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-212ENST00000480461 PIRO00625 290 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 SPTLC1O15269 473 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 LRRN2O75325 713 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 FGF18O76093 207 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 KIF4AO95239 1232 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 TRIM49P0CI25 452 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 TRIM49CP0CI26 452 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 LAG3P18627 525 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 CTNNB1P35222 781 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 LTBRP36941 435 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 GPM6BQ13491 265 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 IER5LQ5T953 404 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 C9orf57Q5W0N0 161 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 C15orf39Q6ZRI6 1047 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 TRAPPC11Q7Z392 1133 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 WDR49Q8IV35 697 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 HASPINQ8TF76 798 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 ELMO3Q96BJ8 720 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 GPR62Q9BZJ7 368 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 MTMR12Q9C0I1 747 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 SLC38A7Q9NVC3 462 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 UBQLN1Q9UMX0 589 aaKnown RBP13.22□□□□□ -0.29
TRA2B-212ENST00000480461 NLRC5Q86WI3 1866 aa13.22□□□□□ -0.29
TRA2B-212ENST00000480461 ANK1P16157 1881 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 RALGAPA2Q2PPJ7 1873 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 ZDBF2Q9HCK1 2354 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 I3L4J1 428 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 PODXLO00592 558 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 SLC16A3O15427 465 aaKnown RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 VNN1O95497 513 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 RB1P06400 928 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 CCDC192P0DO97 292 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 TNNI1P19237 187 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 BRCC3P46736 316 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms