RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 PHF2O75151 1096 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 TTLL1O95922 423 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 TFAP4Q01664 338 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 DSG1Q02413 1049 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 DUS1LQ6P1R4 473 aaKnown RBP11.53□□□□□ -0.56
CHD6-208ENST00000480022 IRF2BP2Q7Z5L9 587 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 MAP7D3Q8IWC1 876 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHD6-208ENST00000480022 C18orf8Q96DM3 657 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 AK8Q96MA6 479 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 GANQ9H2C0 597 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
CHD6-208ENST00000480022 RIC8AQ9NPQ8 531 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 ANGPTL2Q9UKU9 493 aa11.53□□□□□ -0.56
CHD6-208ENST00000480022 POLR2AP24928 1970 aaKnown RBP11.52□□□□□ -0.56
CHD6-208ENST00000480022 TSPY2A6NKD2 308 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 LAD1O00515 517 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 ACSL3O95573 720 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 CHRNA3P32297 505 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 CAP2P40123 477 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 DNAJC3Q13217 504 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 IZUMO2Q6UXV1 221 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.56
CHD6-208ENST00000480022 CCDC17Q96LX7 622 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 SMC6Q96SB8 1091 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 BTBD10Q9BSF8 475 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 PTTG2Q9NZH5 202 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 NDUFA13Q9P0J0 144 aa11.52□□□□□ -0.56
CHD6-208ENST00000480022 CCDC194A0A1B0GVG4 234 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 PVALEFA0A1B0GWK0 134 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 BTBD19C9JJ37 291 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 IDO1P14902 403 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 CYP11B2P19099 503 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 RGS2P41220 211 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
CHD6-208ENST00000480022 TROAPQ12815 778 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 FSTL1Q12841 308 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 PFKFB3Q16875 520 aaPredicted RBP11.52□□□□□ -0.57
CHD6-208ENST00000480022 ABCB5Q2M3G0 1257 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 SLC44A4Q53GD3 710 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 SLC45A4Q5BKX6 768 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 SRBD1Q8N5C6 995 aaKnown RBP11.52□□□□□ -0.57
CHD6-208ENST00000480022 C10orf82Q8WW14 230 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 ART4Q93070 314 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 PPP2R3CQ969Q6 453 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 ZSCAN10Q96SZ4 725 aaPredicted RBP11.52□□□□□ -0.57
CHD6-208ENST00000480022 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.57
CHD6-208ENST00000480022 SUN2Q9UH99 717 aa11.52□□□□□ -0.57
CHD6-208ENST00000480022 GSC2O15499 205 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 EXOC3O60645 756 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ZWINTO95229 277 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 GH2P01242 217 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 FKBP3Q00688 224 aaKnown RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ZNF568Q3ZCX4 644 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 CCDC80Q76M96 950 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 SCUBE1Q8IWY4 988 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 NEDD1Q8NHV4 660 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 MCUR1Q96AQ8 359 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ECSITQ9BQ95 431 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 OXCT2Q9BYC2 517 aaPredicted RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ADGRA3Q8IWK6 1321 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 NPHP3-ACAD11A0A0J9YXS1 232 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 NMT2O60551 498 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 OPHN1O60890 802 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 DDAH1O94760 285 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ASMTLO95671 621 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 HSPA6P17066 643 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 FUT4P22083 530 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ANXA13P27216 316 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 CD97P48960 835 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 CYLC2Q14093 348 aaPredicted RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 KBTBD12Q3ZCT8 623 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 USH1GQ495M9 461 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 SRRM1Q8IYB3 904 aaKnown RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 RSPH1Q8WYR4 309 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 MAML3Q96JK9 1138 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 BRD8Q9H0E9 1235 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 IL17RBQ9NRM6 502 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.51□□□□□ -0.57
CHD6-208ENST00000480022 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 PCDHA3Q9Y5H8 950 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 WASF2Q9Y6W5 498 aa11.51□□□□□ -0.57
CHD6-208ENST00000480022 PLIN4Q96Q06 1357 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 GYG2O15488 501 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 RNASEH1O60930 286 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 NT5C2P49902 561 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 OXCT1P55809 520 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 WDR4P57081 412 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 FKBP1BP68106 108 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms