RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 SGSM2O43147 1006 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
CCDC18-208ENST00000479653 PRKCBP05771 671 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 CDC27P30260 824 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 SCAPQ12770 1279 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 TWF1Q12792 350 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 GRSF1Q12849 480 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC18-208ENST00000479653 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
CCDC18-208ENST00000479653 Q4G0T1 1027 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 ARHGAP29Q52LW3 1261 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 SLC8B1Q6J4K2 584 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 B3GNT9Q6UX72 402 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 TCEAL8Q8IYN2 117 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
CCDC18-208ENST00000479653 CXCL16Q9H2A7 254 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 CEP72Q9P209 647 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 PPME1Q9Y570 386 aa12.33□□□□□ -0.44
CCDC18-208ENST00000479653 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 H0Y626 953 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 EML1O00423 815 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 MEFVO15553 781 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TRIM16O95361 564 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TDP2O95551 362 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
CCDC18-208ENST00000479653 ADD1P35611 737 aaKnown RBP12.32□□□□□ -0.44
CCDC18-208ENST00000479653 MAPK8P45983 427 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 BRCC3P46736 316 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 CLCNKBP51801 687 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TNK2Q07912 1038 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 C19orf57Q0VDD7 668 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 BMP2KLQ5H9B9 411 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 CYP2U1Q7Z449 544 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 ARID3BQ8IVW6 561 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-208ENST00000479653 LEMD2Q8NC56 503 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 SHKBP1Q8TBC3 707 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TCEANC2Q96MN5 208 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 WRAP73Q9P2S5 460 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-208ENST00000479653 TICRRQ7Z2Z1 1910 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
CCDC18-208ENST00000479653 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 CYSRT1A8MQ03 144 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 SLC27A2O14975 620 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 ZBTB39O15060 712 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 TBX3O15119 743 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 RNF40O75150 1001 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 RECQL4O94761 1208 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 CAPNS1P04632 268 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 P4HBP07237 508 aaKnown RBP12.31□□□□□ -0.44
CCDC18-208ENST00000479653 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
CCDC18-208ENST00000479653 DGKEP52429 567 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 POU5F1BQ06416 359 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 CAPSQ13938 189 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 PTPAQ15257 358 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 NAB2Q15742 525 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
CCDC18-208ENST00000479653 ASAP3Q8TDY4 903 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 PIGKQ92643 395 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 LRRC3BQ96PB8 259 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
CCDC18-208ENST00000479653 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
CCDC18-208ENST00000479653 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 FAM221BA6H8Z2 402 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 DHPSP49366 369 aaPredicted RBP12.3□□□□□ -0.44
CCDC18-208ENST00000479653 AKAP17AQ02040 695 aaKnown RBP12.3□□□□□ -0.44
CCDC18-208ENST00000479653 LMAN2Q12907 356 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 ITPRIPL2Q3MIP1 535 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 GLRA4Q5JXX5 417 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 STXBP5Q5T5C0 1151 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 FSTL4Q6MZW2 842 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 NOSTRINQ8IVI9 506 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 GDAQ9Y2T3 454 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 TDRD15B5MCY1 1934 aaKnown RBP12.3□□□□□ -0.44
CCDC18-208ENST00000479653 COL4A2P08572 1712 aa12.3□□□□□ -0.44
CCDC18-208ENST00000479653 H7C4K7 107 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 APBB3O95704 486 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 PRB1P04280 392 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 EPHA5P54756 1037 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 UPP1Q16831 310 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 CTXN3Q4LDR2 81 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 USP39Q53GS9 565 aaKnown RBP12.29□□□□□ -0.44
CCDC18-208ENST00000479653 TRIM61Q5EBN2 209 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 TMEM196Q5HYL7 178 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 TPGS2Q68CL5 300 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 C4orf19Q8IY42 314 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 ETNPPLQ8TBG4 499 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 LXNQ9BS40 222 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 NUSAP1Q9BXS6 441 aaKnown RBP12.29□□□□□ -0.44
CCDC18-208ENST00000479653 GOLGA2P5Q9HBQ8 144 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 XPNPEP1Q9NQW7 623 aa12.29□□□□□ -0.44
CCDC18-208ENST00000479653 THG1LQ9NWX6 298 aaKnown RBP12.29□□□□□ -0.44
CCDC18-208ENST00000479653 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms