RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 MCTP2Q6DN12 878 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 CNNM4Q6P4Q7 775 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 FOXR1Q6PIV2 292 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 USP17L6PQ6QN14 398 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 TSHZ1Q6ZSZ6 1077 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 VSIG10LQ86VR7 867 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 CMTR2Q8IYT2 770 aaKnown RBP4.51□□□□□ -1.69
COPS7B-220ENST00000479430 MAML2Q8IZL2 1156 aaPredicted RBP4.51□□□□□ -1.69
COPS7B-220ENST00000479430 TDRD5Q8NAT2 981 aaKnown RBP4.51□□□□□ -1.69
COPS7B-220ENST00000479430 SUMF1Q8NBK3 374 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 PI4K2BQ8TCG2 481 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 APBB2Q92870 758 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 LPPQ93052 612 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 P2RX5Q93086 422 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 IWS1Q96ST2 819 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 PCYT2Q99447 389 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 KIF2CQ99661 725 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 PLVAPQ9BX97 442 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 NACAP1Q9BZK3 213 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 GBP3Q9H0R5 595 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 TBC1D17Q9HA65 648 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 ZNF287Q9HBT7 754 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
COPS7B-220ENST00000479430 ARHGEF4Q9NR80 690 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 ZBTB40Q9NUA8 1239 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 SUSD2Q9UGT4 822 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 TUBE1Q9UJT0 475 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 USP18Q9UMW8 372 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 PCDHB12Q9Y5F1 795 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 SHROOM3Q8TF72 1996 aa4.51□□□□□ -1.69
COPS7B-220ENST00000479430 GREB1Q4ZG55 1949 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 WDR19Q8NEZ3 1342 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 BPTFQ12830 3046 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 CCDC163A0A0D9SF12 145 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 CYSRT1A8MQ03 144 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ADARB2-AS1A8MUL3 147 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 PLD2O14939 933 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ORC4O43929 436 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 B4GALT3O60512 393 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 RGS9O75916 674 aaPredicted RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 TOP3BO95985 862 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 VTNP04004 478 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 SNHG28P0DPA3 235 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 GNAT2P19087 354 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 GRIA2P42262 883 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 HSD17B4P51659 736 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 CLCN5P51795 746 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 HNRNPUQ00839 825 aaKnown RBP eCLIP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 SRSF5Q13243 272 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 UBE2SQ16763 222 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 KIZQ2M2Z5 673 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ZC3H12BQ5HYM0 836 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 PPM1JQ5JR12 505 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 TMED8Q6PL24 325 aaPredicted RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 KCNT2Q6UVM3 1135 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 MRPS27Q92552 414 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 TTC9Q92623 222 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 GLG1Q92896 1179 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 PPP2R3CQ969Q6 453 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ACSF2Q96CM8 615 aaPredicted RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 KLHDC7BQ96G42 594 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 MYADMQ96S97 322 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 CDC6Q99741 560 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 MDFIQ99750 246 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 MYL10Q9BUA6 226 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 TARS2Q9BW92 718 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 VN1R3Q9BXE9 311 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 EPN3Q9H201 632 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 SOX17Q9H6I2 414 aaPredicted RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 KCNK12Q9HB15 430 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 DLL3Q9NYJ7 618 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 FRRS1LQ9P0K9 344 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 NCDNQ9UBB6 729 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ST3GAL5Q9UNP4 418 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 MRPL11Q9Y3B7 192 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 MRPS23Q9Y3D9 190 aaKnown RBP4.5□□□□□ -1.69
COPS7B-220ENST00000479430 RWDD3Q9Y3V2 267 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 NR2E1Q9Y466 385 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 PCDHA1Q9Y5I3 950 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 TRPV2Q9Y5S1 764 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 ZFYVE26Q68DK2 2539 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 VWA8A3KMH1 1905 aa4.5□□□□□ -1.69
COPS7B-220ENST00000479430 AKAP13Q12802 2813 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 ADAMTS20P59510 1910 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 TRBV23-1A0A0A0MS06 115 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 DENND3A2RUS2 1198 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 B4DLN1 442 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 F8W810 466 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 CYTH3O43739 400 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 HMMRO75330 724 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 RFPL2O75678 378 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 DLGAP3O95886 979 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 EOMESO95936 686 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 PARP1P09874 1014 aaKnown RBP4.49□□□□□ -1.69
COPS7B-220ENST00000479430 RXRAP19793 462 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 SARSP49591 514 aaKnown RBP4.49□□□□□ -1.69
COPS7B-220ENST00000479430 ARL4DP49703 201 aa4.49□□□□□ -1.69
COPS7B-220ENST00000479430 GUCY2FP51841 1108 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms