RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZCCHC17Q9NP64 241 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 KCNQ5Q9NR82 932 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 OLFML3Q9NRN5 406 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 RNF186Q9NXI6 227 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 TMOD2Q9NZR1 351 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 SEL1LQ9UBV2 794 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 FBXL5Q9UKA1 691 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 VAV3Q9UKW4 847 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 RABGAP1Q9Y3P9 1069 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 PCDHGC5Q9Y5F6 944 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 PARP14Q460N5 1801 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 ARID2Q68CP9 1835 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 FER1L6Q2WGJ9 1857 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 IGLV3-22A0A075B6J6 115 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 A0A1W2PPC1 479 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FAM86B1E9PN63 330 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 GCOM1H8Y6P7 765 aaPredicted RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SOX1O00570 391 aaPredicted RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 BUB1O43683 1085 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 OPA1O60313 960 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 PLA2G6O60733 806 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 PRPF6O94906 941 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 GCNT3O95395 438 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SYF2O95926 243 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 GH2P01242 217 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 NR3C1P04150 777 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FAM86B2P0C5J1 330 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 POLR2MP0CAP2 368 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FERP16591 822 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 STAT2P52630 851 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 NAP1L1P55209 391 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 HNRNPH2P55795 449 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 PSMC6P62333 389 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SETQ01105 290 aaPredicted RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SOX4Q06945 474 aaPredicted RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 RAD51AP2Q09MP3 1159 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 PPP2R5CQ13362 524 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 MAP7Q14244 749 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 EPHA7Q15375 998 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 EXOC3L4Q17RC7 722 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 MEI1Q5TIA1 1274 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 CST9Q5W186 159 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 ALS2CLQ60I27 953 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 C8orf74Q6P047 294 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 NFRKBQ6P4R8 1299 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FAM160B2Q86V87 743 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 IFT20Q8IY31 132 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 DEFB123Q8N688 67 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FAM133AQ8N9E0 248 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 C2CD4AQ8NCU7 369 aaPredicted RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 NEK9Q8TD19 979 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 CHURC1Q8WUH1 139 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FAM168AQ92567 244 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 TBC1D5Q92609 795 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 TAF4BQ92750 862 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SLC5A5Q92911 643 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 CAVIN3Q969G5 261 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 PBKQ96KB5 322 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SPAG5Q96R06 1193 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 CSRNP1Q96S65 589 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 P2RX7Q99572 595 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 WDR11Q9BZH6 1224 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 BHMT2Q9H2M3 363 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 RANBP17Q9H2T7 1088 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 TDRD3Q9H7E2 651 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 DZANK1Q9NVP4 752 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 KCND2Q9NZV8 630 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SALL4Q9UJQ4 1053 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 INTUQ9ULD6 942 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 SOX13Q9UN79 622 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 TMX2Q9Y320 296 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 MRPL11Q9Y3B7 192 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 PCDHAC2Q9Y5I4 1007 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 ASTN1O14525 1302 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 FRMPD4Q14CM0 1322 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 TRPM7Q96QT4 1865 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 KIAA1217Q5T5P2 1943 aa5.36□□□□□ -1.55
SF3B6-202ENST00000478050 ZNFX1Q9P2E3 1918 aaKnown RBP5.36□□□□□ -1.55
SF3B6-202ENST00000478050 DICER1Q9UPY3 1922 aaKnown RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ZMYM2Q9UBW7 1377 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 SYNGAP1Q96PV0 1343 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 LTBP3Q9NS15 1303 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 A0A087X0T9 212 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 A0A0A6YYK5 440 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 GOLGA6BA6NDN3 693 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 GOLGA8KD6RF30 607 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 MEIS1O00470 390 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 NCK2O43639 380 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 GAS7O60861 476 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 HSF2BPO75031 334 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 N4BP1O75113 896 aaKnown RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PALMO75781 387 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PSMD10O75832 226 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 FLOT1O75955 427 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 IGHA2P01877 340 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 H2AFZP0C0S5 128 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 CCDC172P0C7W6 258 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms