RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 CYTH4Q9UIA0 394 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 PIRO00625 290 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 RTN2O75298 545 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.32
PRPF39-203ENST00000477626 CYP3A5P20815 502 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 PEX5P50542 639 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 NOMO3P69849 1222 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 SP3Q02447 781 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 ARHGAP29Q52LW3 1261 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 SPAG5Q96R06 1193 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 MTG1Q9BT17 334 aaPredicted RBP13.02□□□□□ -0.32
PRPF39-203ENST00000477626 BPTFQ12830 3046 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 AKR1B10O60218 316 aa13.02□□□□□ -0.33
PRPF39-203ENST00000477626 FGFR4P22455 802 aa13.02□□□□□ -0.33
PRPF39-203ENST00000477626 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.33
PRPF39-203ENST00000477626 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
PRPF39-203ENST00000477626 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-203ENST00000477626 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.33
PRPF39-203ENST00000477626 TFAP2BQ92481 460 aa13.02□□□□□ -0.33
PRPF39-203ENST00000477626 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 PFKMP08237 780 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 SLC27A1Q6PCB7 646 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 USP37Q86T82 979 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 SLC35G2Q8TBE7 412 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 OSBPL9Q96SU4 736 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 C17orf102A2RUQ5 167 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 RAD23BP54727 409 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 ARID5AQ03989 594 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 SPA17Q15506 151 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 ARHGAP44Q17R89 818 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 DUOXA2Q1HG44 320 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 MRPL10Q7Z7H8 261 aaKnown RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 TWNKQ96RR1 684 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 PCDHB2Q9Y5E7 798 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 NCK2O43639 380 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 ATF7P17544 494 aaPredicted RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 ZNF252P-AS1Q0IIN9 211 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 NOA1Q8NC60 698 aaKnown RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 AVENQ9NQS1 362 aaPredicted RBP13.01□□□□□ -0.33
PRPF39-203ENST00000477626 AKT3Q9Y243 479 aa13.01□□□□□ -0.33
PRPF39-203ENST00000477626 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 CILPO75339 1184 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 TMOD1P28289 359 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 PIK3CAP42336 1068 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 SGSM1Q2NKQ1 1148 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 ZDHHC14Q8IZN3 488 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 INO80BQ9C086 356 aaPredicted RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 ERVK-5Q9HDB9 667 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 ITGA11Q9UKX5 1188 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 PTGESO14684 152 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 CYP2C9P11712 490 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 ATICP31939 592 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 MBTPS1Q14703 1052 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 VWCEQ96DN2 955 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 OSMRQ99650 979 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 LAMA2P24043 3122 aaKnown RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 PPEF2O14830 753 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 GABBR2O75899 941 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 PGK1P00558 417 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 GABRB2P47870 512 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 CDK7P50613 346 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 CETN1Q12798 172 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 SIX1Q15475 284 aaPredicted RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 KIAA1328Q86T90 577 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 CPNE8Q86YQ8 564 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 CD302Q8IX05 232 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 PPM1KQ8N3J5 372 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 UBXN6Q9BZV1 441 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 RNF39Q9H2S5 420 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 POLIQ9UNA4 740 aa13□□□□□ -0.33
PRPF39-203ENST00000477626 NOC2LQ9Y3T9 749 aaKnown RBP13□□□□□ -0.33
PRPF39-203ENST00000477626 BUB1BO60566 1050 aaPredicted RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 HMGCRP04035 888 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 ELNP15502 786 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 MRPS6P82932 125 aaKnown RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 KCNA10Q16322 511 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 PLEKHA7Q6IQ23 1121 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 TAF2Q6P1X5 1199 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 MCOLN2Q8IZK6 566 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 KBTBD7Q8WVZ9 684 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms