RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RIN2Q8WYP3 895 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 C18orf25Q96B23 403 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 GSDMAQ96QA5 445 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 CBWD1Q9BRT8 395 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 GOLPH3LQ9H4A5 285 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 LMBRD1Q9NUN5 540 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 RBAKQ9NYW8 714 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
CLCNKA-205ENST00000477360 TISP43B9A030 160 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 F8W810 466 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 PIRO00625 290 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 TBC1D4O60343 1298 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 TYMPP19971 482 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 HOXA9P31269 272 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 MTHFRP42898 656 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 KCNQ1P51787 676 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 STK4Q13043 487 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 PSMD5Q16401 504 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 JADE1Q6IE81 842 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 SYCE2Q6PIF2 218 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 ADHFE1Q8IWW8 467 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 RIPOR3Q96MK2 946 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 FAM213AQ9BRX8 229 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 SLC39A2Q9NP94 309 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 ZDHHC7Q9NXF8 308 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 HSPBP1Q9NZL4 362 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 ITGA11Q9UKX5 1188 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
CLCNKA-205ENST00000477360 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 REV3LO60673 3130 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 MAPK13O15264 365 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 OAZ2O95190 189 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 SMC2O95347 1197 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 MCM4P33991 863 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 PPP1R2P41236 205 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 AP3M2P53677 418 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 LILRA4P59901 499 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 TPGS2Q68CL5 300 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 LRRC52Q8N7C0 313 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 KIAA0895Q8NCT3 520 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 AUTS2Q8WXX7 1259 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 CLSTN3Q9BQT9 956 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 DMAC2Q9NW81 257 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 DPP3Q9NY33 737 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 DSEQ9UL01 958 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 TRAF3IP3Q9Y228 551 aa13.38□□□□□ -0.27
CLCNKA-205ENST00000477360 C2CD2LO14523 706 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 KINO60870 393 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 CYP11A1P05108 521 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 NFICP08651 508 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 PTMSP20962 102 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 CASP1P29466 404 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 CA8P35219 290 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 PSMD6Q15008 389 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 DUOXA2Q1HG44 320 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 ATAT1Q5SQI0 421 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 FOXR2Q6PJQ5 311 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 GPR149Q86SP6 731 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 USP37Q86T82 979 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 ZNF461Q8TAF7 563 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 MFSD14AQ96MC6 490 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 ZNF560Q96MR9 790 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 PHF7Q9BWX1 381 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 KCTD10Q9H3F6 313 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 USP15Q9Y4E8 981 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 PDCD11Q14690 1871 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-205ENST00000477360 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 TGM5O43548 720 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 CALUO43852 315 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 ABLIM3O94929 683 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 CSPG5O95196 566 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 FAM163BP0C2L3 166 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 EPCAMP16422 314 aa13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-205ENST00000477360 TAF6P49848 677 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms