RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MYO10Q9HD67 2058 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 CSDE1O75534 798 aaKnown RBP8.04□□□□□ -1.12
BRCA1-214ENST00000477152 GLUD1P00367 558 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 NEFLP07196 543 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 FAM157BP0CG42 384 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 TCF3P15923 654 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 OR1G1P47890 313 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 SLC11A1P49279 550 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 GLUD2P49448 558 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 TCF15Q12870 199 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 DRP2Q13474 957 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 TOB2Q14106 344 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-214ENST00000477152 EMC2Q15006 297 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PTPN14Q15678 1187 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PLA2G4FQ68DD2 849 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PDXDC1Q6P996 788 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 RPS6KC1Q96S38 1066 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 LXNQ9BS40 222 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PLEKHA4Q9H4M7 779 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 IFT122Q9HBG6 1241 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 KCNMB3Q9NPA1 279 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 NDFIP2Q9NV92 336 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PCDHA12Q9UN75 941 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 XIRP2A4UGR9 3374 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 MUC3AQ02505 3323 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PROB1E7EW31 1015 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 INO80B-WBP1J3KQ70 363 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 NRP1O14786 923 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 MMP20O60882 483 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 STBD1O95210 358 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 XRCC6P12956 609 aaKnown RBP eCLIP8.04□□□□□ -1.12
BRCA1-214ENST00000477152 EPCAMP16422 314 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 CLCN4P51793 760 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 AK2P54819 239 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 ANAPC15P60006 121 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
BRCA1-214ENST00000477152 LONRF3Q496Y0 759 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 TMC5Q6UXY8 1006 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 Q6ZNB5 142 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 ZBTB8OSQ8IWT0 167 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 TPH2Q8IWU9 490 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 TMEM143Q96AN5 459 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 CEP89Q96ST8 783 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 CSRNP2Q9H175 543 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 SEMA4AQ9H3S1 761 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 VTI1BQ9UEU0 232 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 VAV3Q9UKW4 847 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 ZFP37Q9Y6Q3 630 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-214ENST00000477152 ARID2Q68CP9 1835 aa8.04□□□□□ -1.12
BRCA1-214ENST00000477152 MTCL1Q9Y4B5 1905 aaKnown RBP8.03□□□□□ -1.12
BRCA1-214ENST00000477152 POMCP01189 267 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 SSBP05455 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
BRCA1-214ENST00000477152 VAMP1P23763 118 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 GNA15P30679 374 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 GBP2P32456 591 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-214ENST00000477152 VCPP55072 806 aaKnown RBP8.03□□□□□ -1.12
BRCA1-214ENST00000477152 NPEPPSP55786 919 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 PTENP60484 403 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 ELAVL2Q12926 359 aaKnown RBP8.03□□□□□ -1.12
BRCA1-214ENST00000477152 CALCRLQ16602 461 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 USP41Q3LFD5 358 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 KSR1Q8IVT5 923 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 ERMNQ8TAM6 284 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 BORCS6Q96GS4 357 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 SH2D3AQ9BRG2 576 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 NFKBIZQ9BYH8 718 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 DNAJC25Q9H1X3 360 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 C2orf40Q9H1Z8 148 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.03□□□□□ -1.127e-7■□□□□ 9.9
BRCA1-214ENST00000477152 ORC3Q9UBD5 711 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-214ENST00000477152 DUSP12Q9UNI6 340 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 KCNJ14Q9UNX9 436 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 DENND4AQ7Z401 1863 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 PIEZO1Q92508 2521 aa8.03□□□□□ -1.12
BRCA1-214ENST00000477152 CDC14CA4D256 554 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 RBAK-RBAKDNI3L0D1 243 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 ADAMTS3O15072 1205 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 INPPL1O15357 1258 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 SLC37A4O43826 429 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 PFKFB2O60825 505 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 TADA2AO75478 443 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 LYPLA2O95372 231 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 CNPP09543 421 aaKnown RBP8.02□□□□□ -1.12
BRCA1-214ENST00000477152 NFKB1P19838 968 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 CES1P23141 567 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 GRIK3Q13003 919 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 CCINQ13939 588 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 SLC27A1Q6PCB7 646 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 C12orf76Q8N812 135 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-214ENST00000477152 MCPH1Q8NEM0 835 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 FLCNQ8NFG4 579 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 AUTS2Q8WXX7 1259 aa8.02□□□□□ -1.12
BRCA1-214ENST00000477152 NKD2Q969F2 451 aaPredicted RBP8.02□□□□□ -1.12
BRCA1-214ENST00000477152 GJA10Q969M2 543 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms