RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ARPP19P56211 112 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-213ENST00000476777 CALCRLQ16602 461 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 DCAF4L1Q3SXM0 396 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 WDR44Q5JSH3 913 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 HEATR6Q6AI08 1181 aaKnown RBP12.51□□□□□ -0.41
BRCA1-213ENST00000476777 IL31Q6EBC2 164 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 MFSD6LQ8IWD5 586 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 ZSCAN18Q8TBC5 510 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-213ENST00000476777 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-213ENST00000476777 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
BRCA1-213ENST00000476777 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 CEP72Q9P209 647 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 ATG2BQ96BY7 2078 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 SMIM28A0A1B0GU29 152 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 HEPACAM2A8MVW5 462 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 SPATA31C1P0DKV0 1188 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
BRCA1-213ENST00000476777 GJA1P17302 382 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 XBP1P17861 261 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 LIG1P18858 919 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 ATP2B1P20020 1258 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 HOXA6P31267 233 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 HOXC13P31276 330 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 EPHA5P54756 1037 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 NR5A1Q13285 461 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 MRPL58Q14197 206 aaKnown RBP12.5□□□□□ -0.41
BRCA1-213ENST00000476777 LRRC32Q14392 662 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 TPGS2Q68CL5 300 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 IQCEQ6IPM2 695 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 C1orf228Q6PIY5 440 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 Q6ZS52 159 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 TNFRSF25Q93038 417 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 RSPRY1Q96DX4 576 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 MSANTD3Q96H12 275 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 CACNA1EQ15878 2313 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 NBEAQ8NFP9 2946 aa12.5□□□□□ -0.41
BRCA1-213ENST00000476777 PDCD11Q14690 1871 aaKnown RBP12.49□□□□□ -0.41
BRCA1-213ENST00000476777 SYN3O14994 580 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 DTNBO60941 627 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 CDKL5O76039 1030 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 MYL4P12829 197 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 TXKP42681 527 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 NAMPTP43490 491 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 SOX9P48436 509 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 SCRN1Q12765 414 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 TWF1Q12792 350 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
BRCA1-213ENST00000476777 TEAD2Q15562 447 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 AASDHQ4L235 1098 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-213ENST00000476777 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 TXNDC11Q6PKC3 985 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 ALKAL1Q6UXT8 129 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 CEP68Q76N32 757 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 ELMOD1Q8N336 334 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 DEPTORQ8TB45 409 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 ZNF512Q96ME7 567 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-213ENST00000476777 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 KIFC3Q9BVG8 833 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 C8orf33Q9H7E9 229 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-213ENST00000476777 CYP46A1Q9Y6A2 500 aa12.49□□□□□ -0.41
BRCA1-213ENST00000476777 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 SLC38A8A6NNN8 435 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 H7C4K7 107 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 PODXLO00592 558 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 WNT7AO00755 349 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 CHADO15335 359 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 ZNF806P0C7X5 589 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 CYP11B2P19099 503 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 FCHO2Q0JRZ9 810 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 CCDC6Q16204 474 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 CTXN3Q4LDR2 81 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 DGKKQ5KSL6 1271 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 ATF7IP2Q5U623 682 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 SHKBP1Q8TBC3 707 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 CSGALNACT1Q8TDX6 532 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 E2F7Q96AV8 911 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 ARRDC1-AS1Q9H2J1 176 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 ASAH2Q9NR71 780 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-213ENST00000476777 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
BRCA1-213ENST00000476777 MAFFQ9ULX9 164 aa12.48□□□□□ -0.41
BRCA1-213ENST00000476777 WDFY3Q8IZQ1 3526 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 SPECC1L-ADORA2AF8WAN1 911 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 AXIN1O15169 862 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 MED24O75448 989 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 PROS1P07225 676 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 CTHP32929 405 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 KRT2P35908 639 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms