RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SIX1Q15475 284 aaPredicted RBP17.56■□□□□ 0.4
TMEM53-208ENST00000476724 SKIDA1Q1XH10 827 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 TTC27Q6P3X3 843 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 MICALCLQ6ZW33 695 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 FBXO25Q8TCJ0 367 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 SLC7A3Q8WY07 619 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 BTBD6Q96KE9 485 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 TMEM134Q9H6X4 195 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 SLC12A6Q9UHW9 1150 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 ANAPC7Q9UJX3 599 aa17.56■□□□□ 0.4
TMEM53-208ENST00000476724 NOVA2Q9UNW9 492 aaKnown RBP17.56■□□□□ 0.4
TMEM53-208ENST00000476724 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM53-208ENST00000476724 IGKV6D-21A0A0A0MT36 114 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 CYP1A1P04798 512 aaPredicted RBP17.55■□□□□ 0.4
TMEM53-208ENST00000476724 ADORA2AP29274 412 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 MAN1A1P33908 653 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 PIK3CAP42336 1068 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 RPL21P46778 160 aaKnown RBP17.55■□□□□ 0.4
TMEM53-208ENST00000476724 CCNA1P78396 465 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 CENPCQ03188 943 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 NEDD9Q14511 834 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 DENND2CQ68D51 928 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 VCPIP1Q96JH7 1222 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 CNOT10Q9H9A5 744 aaKnown RBP17.55■□□□□ 0.4
TMEM53-208ENST00000476724 PDGFCQ9NRA1 345 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 GGA2Q9UJY4 613 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
TMEM53-208ENST00000476724 SIP14410 1827 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 A0A087WUV0 522 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 TRIM66O15016 1216 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 FAM107AO95990 144 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 TGFB3P10600 412 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 GLRA2P23416 452 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 TBXAS1P24557 533 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 NSFP46459 744 aaKnown RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 GCLCP48506 637 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 PTP4A2Q12974 167 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 BYSLQ13895 437 aaKnown RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 RASAL3Q86YV0 1011 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 COPS5Q92905 334 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 TLCD1Q96CP7 247 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 MPHOSPH6Q99547 160 aaKnown RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 NRBP2Q9NSY0 501 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 ECEL1O95672 775 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 NLRP11P59045 1033 aaKnown RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 SLC20A2Q08357 652 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 ZNF792Q3KQV3 632 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 HSDL1Q3SXM5 330 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 LIN9Q5TKA1 542 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 TDRD10Q5VZ19 366 aaKnown RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 METTL7BQ6UX53 244 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 CRELD2Q6UXH1 353 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 SYDE1Q6ZW31 735 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 NLRP14Q86W24 1093 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 PPM1EQ8WY54 764 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 ART4Q93070 314 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 TMEM143Q96AN5 459 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 PGM2Q96G03 612 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 RBAKQ9NYW8 714 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-208ENST00000476724 PPME1Q9Y570 386 aa17.54■□□□□ 0.4
TMEM53-208ENST00000476724 LRRIQ4A6NIV6 560 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 ECM2O94769 699 aaPredicted RBP17.53■□□□□ 0.4
TMEM53-208ENST00000476724 PAEPP09466 180 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 RARGP13631 454 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 TCF7P36402 384 aaPredicted RBP17.53■□□□□ 0.4
TMEM53-208ENST00000476724 AP3M2P53677 418 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 ARMCX2Q7L311 632 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 ASAP3Q8TDY4 903 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 CCT8L2Q96SF2 557 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 PARK7Q99497 189 aaKnown RBP17.53■□□□□ 0.4
TMEM53-208ENST00000476724 CGRRF1Q99675 332 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 TMEM109Q9BVC6 243 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 EPB41L4BQ9H329 900 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 MRPL47Q9HD33 250 aaKnown RBP17.53■□□□□ 0.4
TMEM53-208ENST00000476724 CNTN6Q9UQ52 1028 aa17.53■□□□□ 0.4
TMEM53-208ENST00000476724 A0A0B4J269 797 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 TCRBV7S2A1N4TA0A589 114 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 ACOT2P49753 483 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.4
TMEM53-208ENST00000476724 MAGOHP61326 146 aaKnown RBP17.52■□□□□ 0.4
TMEM53-208ENST00000476724 CALCOCO2Q13137 446 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 CUL2Q13617 745 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 SMYD5Q6GMV2 418 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 CCDC62Q6P9F0 684 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 GPR142Q7Z601 462 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 ZNF473Q8WTR7 871 aaKnown RBP17.52■□□□□ 0.4
TMEM53-208ENST00000476724 MSTO1Q9BUK6 570 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 RABEP2Q9H5N1 569 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 HOMER3Q9NSC5 361 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 WHRNQ9P202 907 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 MROH7Q68CQ1 1323 aa17.52■□□□□ 0.4
TMEM53-208ENST00000476724 GMNCA6NCL1 334 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 IGF2BP3O00425 579 aaKnown RBP eCLIP17.52■□□□□ 0.39
TMEM53-208ENST00000476724 ACO1P21399 889 aaKnown RBP17.52■□□□□ 0.39
TMEM53-208ENST00000476724 ADCY2Q08462 1091 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 SGO2Q562F6 1265 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 C6orf118Q5T5N4 469 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 ABRAQ8N0Z2 381 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms