RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 NRG2O14511 850 aaPredicted RBP22.41■■□□□ 1.18
VPS36-203ENST00000475375 ZNF263O14978 683 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 TDGF1P13385 188 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 GJA1P17302 382 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 TWF1Q12792 350 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 TPGS2Q68CL5 300 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 MAP4K3Q8IVH8 894 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 DEPDC1BQ8WUY9 529 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 ACAP3Q96P50 834 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 ASAH2Q9NR71 780 aa22.41■■□□□ 1.18
VPS36-203ENST00000475375 TRIP11Q15643 1979 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 HARSP12081 509 aaKnown RBP22.4■■□□□ 1.18
VPS36-203ENST00000475375 CPB1P15086 417 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 CCNE1P24864 410 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 MCM4P33991 863 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 CXCL12P48061 93 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 PEX3P56589 373 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 XKR4Q5GH76 650 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 ZNF280DQ6N043 979 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 ALKAL1Q6UXT8 129 aa22.4■■□□□ 1.18
VPS36-203ENST00000475375 ZSCAN18Q8TBC5 510 aaPredicted RBP22.4■■□□□ 1.18
VPS36-203ENST00000475375 ZMAT2Q96NC0 199 aaKnown RBP22.4■■□□□ 1.18
VPS36-203ENST00000475375 ACO2Q99798 780 aaKnown RBP22.4■■□□□ 1.18
VPS36-203ENST00000475375 MRPL4Q9BYD3 311 aaKnown RBP22.4■■□□□ 1.18
VPS36-203ENST00000475375 PHLPP2Q6ZVD8 1323 aa22.39■■□□□ 1.18
VPS36-203ENST00000475375 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.39■■□□□ 1.17
VPS36-203ENST00000475375 RETP07949 1114 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 RPL9P32969 192 aaKnown RBP22.39■■□□□ 1.17
VPS36-203ENST00000475375 SATB1Q01826 763 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 SIM2Q14190 667 aaPredicted RBP22.39■■□□□ 1.17
VPS36-203ENST00000475375 MAMSTRQ6ZN01 415 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 YAF2Q8IY57 180 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 APPL2Q8NEU8 664 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 NETO1Q8TDF5 533 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 CSGALNACT1Q8TDX6 532 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 C18orf25Q96B23 403 aaPredicted RBP22.39■■□□□ 1.17
VPS36-203ENST00000475375 TARS2Q9BW92 718 aaKnown RBP22.39■■□□□ 1.17
VPS36-203ENST00000475375 TRPV5Q9NQA5 729 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 CEP72Q9P209 647 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 KIAA1024Q9UPX6 916 aa22.39■■□□□ 1.17
VPS36-203ENST00000475375 KCNE1P15382 129 aa22.38■■□□□ 1.17
VPS36-203ENST00000475375 MUTP22033 750 aa22.38■■□□□ 1.17
VPS36-203ENST00000475375 MARCKSP29966 332 aaPredicted RBP22.38■■□□□ 1.17
VPS36-203ENST00000475375 ANAPC15P60006 121 aa22.38■■□□□ 1.17
VPS36-203ENST00000475375 DMP1Q13316 513 aaPredicted RBP22.38■■□□□ 1.17
VPS36-203ENST00000475375 MRPL58Q14197 206 aaKnown RBP22.38■■□□□ 1.17
VPS36-203ENST00000475375 ECM1Q16610 540 aa22.38■■□□□ 1.17
VPS36-203ENST00000475375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.38■■□□□ 1.17
VPS36-203ENST00000475375 LEMD2Q8NC56 503 aa22.38■■□□□ 1.17
VPS36-203ENST00000475375 SUSD3Q96L08 255 aa22.38■■□□□ 1.17
VPS36-203ENST00000475375 DDX19AQ9NUU7 478 aaKnown RBP22.38■■□□□ 1.17
VPS36-203ENST00000475375 AFF4Q9UHB7 1163 aaKnown RBP22.38■■□□□ 1.17
VPS36-203ENST00000475375 KMT2BQ9UMN6 2715 aaPredicted RBP22.37■■□□□ 1.17
VPS36-203ENST00000475375 CHURC1-FNTBB4DL54 471 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 MOSPD3O75425 235 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 MCF2P10911 925 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 KCNA4P22459 653 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 NPTX2P47972 431 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 FNTBP49356 437 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 KPNA1P52294 538 aaPredicted RBP22.37■■□□□ 1.17
VPS36-203ENST00000475375 TEAD2Q15562 447 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 PPM1JQ5JR12 505 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 RNF19BQ6ZMZ0 732 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 MFSD6LQ8IWD5 586 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 TBC1D32Q96NH3 1257 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 PTPRHQ9HD43 1115 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 KMT5AQ9NQR1 393 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 CNTN3Q9P232 1028 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 LRWD1Q9UFC0 647 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 TICRRQ7Z2Z1 1910 aa22.37■■□□□ 1.17
VPS36-203ENST00000475375 HEPACAM2A8MVW5 462 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 ADRB1P08588 477 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 CHRNB1P11230 501 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 ORC2Q13416 577 aaPredicted RBP22.36■■□□□ 1.17
VPS36-203ENST00000475375 LRRC32Q14392 662 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 HEATR6Q6AI08 1181 aaKnown RBP22.36■■□□□ 1.17
VPS36-203ENST00000475375 MPZL3Q6UWV2 235 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 DDX12PQ92771 950 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 TMEM134Q9H6X4 195 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 TRPV4Q9HBA0 871 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 SEMA4GQ9NTN9 838 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 MAFFQ9ULX9 164 aa22.36■■□□□ 1.17
VPS36-203ENST00000475375 SLC30A4O14863 429 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 LRP3O75074 770 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 HIP1RO75146 1068 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 SRSF5Q13243 272 aaKnown RBP22.35■■□□□ 1.17
VPS36-203ENST00000475375 GNL2Q13823 731 aaKnown RBP22.35■■□□□ 1.17
VPS36-203ENST00000475375 ST3GAL2Q16842 350 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 TTC38Q5R3I4 469 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 SPEM1Q8N4L4 309 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 FAM200AQ8TCP9 573 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 E2F7Q96AV8 911 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 CHAMP1Q96JM3 812 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 GPR88Q9GZN0 384 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 RBM12Q9NTZ6 932 aaKnown RBP22.35■■□□□ 1.17
VPS36-203ENST00000475375 ANKFY1Q9P2R3 1169 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 PCDHB8Q9UN66 801 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 YIPF1Q9Y548 306 aa22.35■■□□□ 1.17
VPS36-203ENST00000475375 NCANO14594 1321 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 SLC38A8A6NNN8 435 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms