RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 IKZF4Q9H2S9 585 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 KMT5AQ9NQR1 393 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.49□□□□□ -1.37
CPSF7-210ENST00000474684 BLOC1S4Q9NUP1 217 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 FNIP2Q9P278 1114 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 MTRRQ9UBK8 725 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 CDY1Q9Y6F8 540 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 CACNA1AO00555 2505 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 NCANO14594 1321 aa6.49□□□□□ -1.37
CPSF7-210ENST00000474684 SMIM28A0A1B0GU29 152 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 WDR27A2RRH5 827 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 FAM181BA6NEQ2 426 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 K7ERI5 159 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 LAD1O00515 517 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 PODXLO00592 558 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 FAM189A1O60320 539 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 EIF5BO60841 1220 aaKnown RBP6.48□□□□□ -1.37
CPSF7-210ENST00000474684 LRRN2O75325 713 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 NR1I2O75469 434 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 B3GAT3O94766 335 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 PLA2G4BP0C869 781 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 MAPTP10636 758 aaKnown RBP6.48□□□□□ -1.37
CPSF7-210ENST00000474684 PLCG1P19174 1290 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 GUCY2CP25092 1073 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 OR1D2P34982 312 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 EFNA5P52803 228 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 NCKAP1LP55160 1127 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ROR1Q01973 937 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 TDGQ13569 410 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 PDIA5Q14554 519 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 NOLC1Q14978 699 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPSF7-210ENST00000474684 KARSQ15046 597 aaKnown RBP6.48□□□□□ -1.37
CPSF7-210ENST00000474684 UPP1Q16831 310 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 SLC5A9Q2M3M2 681 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ARSHQ5FYA8 562 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 LIN9Q5TKA1 542 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 FAM173BQ6P4H8 233 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 SLC39A4Q6P5W5 647 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 MPZL3Q6UWV2 235 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ALKAL1Q6UXT8 129 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 USP49Q70CQ1 688 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 GPBP1Q86WP2 473 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 NPAS3Q8IXF0 933 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 GPR65Q8IYL9 337 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 SIX5Q8N196 739 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ITFG1Q8TB96 612 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 GPR152Q8TDT2 470 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ING5Q8WYH8 240 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ACSF2Q96CM8 615 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-210ENST00000474684 DRC1Q96MC2 740 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 FIZ1Q96SL8 496 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 RHOBTB2Q9BYZ6 727 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 RAB34Q9BZG1 259 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 PLEKHA4Q9H4M7 779 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 TMEM134Q9H6X4 195 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 PIDD1Q9HB75 910 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 ZDHHC7Q9NXF8 308 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 CNTN3Q9P232 1028 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 EPS15L1Q9UBC2 864 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 STK39Q9UEW8 545 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 CA14Q9ULX7 337 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 DNM3Q9UQ16 869 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 SSX2IPQ9Y2D8 614 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 NUMBLQ9Y6R0 609 aa6.48□□□□□ -1.37
CPSF7-210ENST00000474684 CNOT1A5YKK6 2376 aaKnown RBP6.47□□□□□ -1.37
CPSF7-210ENST00000474684 NUP205Q92621 2012 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 VPS37CA5D8V6 355 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-210ENST00000474684 H3BQV1 296 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 K7ENM7 598 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 SEC24AO95486 1093 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 VNN2O95498 520 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 MCF2P10911 925 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 LAMP2P13473 410 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 PLS3P13797 630 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 KCNE1P15382 129 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 CEBPBP17676 345 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 AOC1P19801 751 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 FSHRP23945 695 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 CREMQ03060 361 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 RESTQ13127 1097 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 RAB33AQ14088 237 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 DHX8Q14562 1220 aaKnown RBP6.47□□□□□ -1.37
CPSF7-210ENST00000474684 MCM6Q14566 821 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 SLC10A6Q3KNW5 377 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 SPECC1Q5M775 1068 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 PPM1LQ5SGD2 360 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 PARM1Q6UWI2 310 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 SYT2Q8N9I0 419 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-210ENST00000474684 HDAC7Q8WUI4 952 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 SPIRE2Q8WWL2 714 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 STAMQ92783 540 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 FGF13Q92913 245 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 FAM84AQ96KN4 292 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 KXD1Q9BQD3 176 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 CCDC94Q9BW85 323 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-210ENST00000474684 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 MFSD1Q9H3U5 465 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 TBC1D17Q9HA65 648 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 DNMT3BQ9UBC3 853 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms