RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CYP3A5P20815 502 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 GARTP22102 1010 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 HOXD13P35453 343 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 SYKP43405 635 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 NUCB2P80303 420 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 SPATA1Q5VX52 437 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 PDXDC1Q6P996 788 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 LILRA6Q6PI73 481 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 ELMSAN1Q6PJG2 1045 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 DSTYKQ6XUX3 929 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 ANKS3Q6ZW76 656 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 EFCAB13Q8IY85 973 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 NECTIN4Q96NY8 510 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 FBXW11Q9UKB1 542 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 TRIP11Q15643 1979 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 C2CD4DB7Z1M9 353 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 EPM2AIP1Q7L775 607 aaPredicted RBP17.35■□□□□ 0.37
ITGB1-210ENST00000474568 BRSK2Q8IWQ3 736 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 SMG7Q92540 1137 aaKnown RBP17.35■□□□□ 0.37
ITGB1-210ENST00000474568 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 ASB7Q9H672 318 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 PIDD1Q9HB75 910 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 RBAKQ9NYW8 714 aaPredicted RBP17.35■□□□□ 0.37
ITGB1-210ENST00000474568 DPP7Q9UHL4 492 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 PCDHB8Q9UN66 801 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 NCOR1O75376 2440 aa17.35■□□□□ 0.37
ITGB1-210ENST00000474568 PVALEFA0A1B0GWK0 134 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 CITO14578 2027 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 SYN3O14994 580 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 CLIC2O15247 247 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 EIF3DO15371 548 aaKnown RBP eCLIP17.34■□□□□ 0.37
ITGB1-210ENST00000474568 DCXO43602 365 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 KLRC4O43908 158 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 EXTL3O43909 919 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 TFAMQ00059 246 aaKnown RBP17.34■□□□□ 0.37
ITGB1-210ENST00000474568 EHHADHQ08426 723 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 RAB33AQ14088 237 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 KMT5BQ4FZB7 885 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 CTXN3Q4LDR2 81 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 C9orf57Q5W0N0 161 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 LMBRD2Q68DH5 695 aaPredicted RBP17.34■□□□□ 0.37
ITGB1-210ENST00000474568 ZNF507Q8TCN5 953 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 SCFD1Q8WVM8 642 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 ZNF707Q96C28 371 aaPredicted RBP17.34■□□□□ 0.37
ITGB1-210ENST00000474568 EXOC1Q9NV70 894 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 DPP3Q9NY33 737 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 FBXL5Q9UKA1 691 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 DERAQ9Y315 318 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 BACE2Q9Y5Z0 518 aa17.34■□□□□ 0.37
ITGB1-210ENST00000474568 PLXNA3P51805 1871 aa17.33■□□□□ 0.37
ITGB1-210ENST00000474568 A0A1W2PQ27 194 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 A0A1W2PQ64 194 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 A0A1W2PQD8 194 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 PI4K2BG5E9Z4 385 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 H7C4K7 107 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 SPTLC1O15269 473 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 CCL16O15467 120 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 ZMYND10O75800 440 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 IL18RAPO95256 599 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 LDHAP00338 332 aaKnown RBP17.33■□□□□ 0.36
ITGB1-210ENST00000474568 C8AP07357 584 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 CYP2J2P51589 502 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 ROR1Q01973 937 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 PPM1LQ5SGD2 360 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 CCDC149Q6ZUS6 474 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 CBWD2Q8IUF1 395 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 GPD1LQ8N335 351 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 TDRD5Q8NAT2 981 aaKnown RBP17.33■□□□□ 0.36
ITGB1-210ENST00000474568 APPL2Q8NEU8 664 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 CMASQ8NFW8 434 aaPredicted RBP17.33■□□□□ 0.36
ITGB1-210ENST00000474568 SLC7A14Q8TBB6 771 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 HDAC7Q8WUI4 952 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 TSPAN18Q96SJ8 248 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 AGPAT3Q9NRZ7 376 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 HSPBP1Q9NZL4 362 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 POLIQ9UNA4 740 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 C2CD2Q9Y426 696 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 NR2E1Q9Y466 385 aa17.33■□□□□ 0.36
ITGB1-210ENST00000474568 VWA8A3KMH1 1905 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 M0QZQ0 153 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 TGFB1I1O43294 461 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 STK4Q13043 487 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 ZNF280DQ6N043 979 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 C15orf39Q6ZRI6 1047 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 SENP8Q96LD8 212 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 PRKD2Q9BZL6 878 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 ZDHHC7Q9NXF8 308 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.32■□□□□ 0.36
ITGB1-210ENST00000474568 BDP1A6H8Y1 2624 aa17.32■□□□□ 0.36
ITGB1-210ENST00000474568 UBE4BO95155 1302 aa17.31■□□□□ 0.36
ITGB1-210ENST00000474568 FAM237AA0A1B0GTK4 181 aa17.31■□□□□ 0.36
ITGB1-210ENST00000474568 WDR27A2RRH5 827 aa17.31■□□□□ 0.36
ITGB1-210ENST00000474568 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
ITGB1-210ENST00000474568 PIRO00625 290 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms