RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 SFR1Q86XK3 245 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 KCNG4Q8TDN1 519 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 DDX12PQ92771 950 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 C18orf25Q96B23 403 aaPredicted RBP17.74■□□□□ 0.43
CPA4-205ENST00000474254 DNAJC19Q96DA6 116 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 SEL1LQ9UBV2 794 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 POLIQ9UNA4 740 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 NUMBLQ9Y6R0 609 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 FAM186AA6NE01 2351 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 NOTCH4Q99466 2003 aa17.74■□□□□ 0.43
CPA4-205ENST00000474254 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 ANHXE9PGG2 379 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 OGTO15294 1046 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 TRAPPC3O43617 180 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 PPP6R2O75170 966 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 F13A1P00488 732 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 C8AP07357 584 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 ZSCAN22P10073 491 aaPredicted RBP17.73■□□□□ 0.43
CPA4-205ENST00000474254 RPL9P32969 192 aaKnown RBP17.73■□□□□ 0.43
CPA4-205ENST00000474254 TNFSF9P41273 254 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 KYAT1Q16773 422 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 PHLDB3Q6NSJ2 640 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 SV2BQ7L1I2 683 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 HVCN1Q96D96 273 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 PLEKHA5Q9HAU0 1116 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 SLC2A4RGQ9NR83 387 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
CPA4-205ENST00000474254 RIF1Q5UIP0 2472 aaKnown RBP17.73■□□□□ 0.43
CPA4-205ENST00000474254 MIA3Q5JRA6 1907 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 A0A0B4J269 797 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 CCL16O15467 120 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 PPP1R37O75864 691 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 GAP43P17677 238 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
CPA4-205ENST00000474254 HOXA9P31269 272 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 BRCC3P46736 316 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 FOXK2Q01167 660 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 ZC2HC1CQ53FD0 456 aaPredicted RBP17.72■□□□□ 0.43
CPA4-205ENST00000474254 ZBTB41Q5SVQ8 909 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
CPA4-205ENST00000474254 MTSS1LQ765P7 747 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
CPA4-205ENST00000474254 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
CPA4-205ENST00000474254 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 CDH7Q9ULB5 785 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 SIT1Q9Y3P8 196 aa17.72■□□□□ 0.43
CPA4-205ENST00000474254 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.72■□□□□ 0.43
CPA4-205ENST00000474254 SPTBN4Q9H254 2564 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 FRMD3A2A2Y4 597 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 I3L4J1 428 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 ADAM12O43184 909 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 DCNP07585 359 aaKnown RBP17.71■□□□□ 0.43
CPA4-205ENST00000474254 PPP2R3AQ06190 1150 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 PKP1Q13835 747 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 ENOX2Q16206 610 aaKnown RBP17.71■□□□□ 0.43
CPA4-205ENST00000474254 ZC3H14Q6PJT7 736 aaKnown RBP17.71■□□□□ 0.43
CPA4-205ENST00000474254 ANKS3Q6ZW76 656 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 ZNF720Q7Z2F6 126 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 ST13P5Q8NFI4 369 aaPredicted RBP17.71■□□□□ 0.43
CPA4-205ENST00000474254 SLC7A14Q8TBB6 771 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 SHDQ96IW2 340 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 MSTO1Q9BUK6 570 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 STRA6Q9BX79 667 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 SEMA4AQ9H3S1 761 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 OLFML3Q9NRN5 406 aa17.71■□□□□ 0.43
CPA4-205ENST00000474254 CUTAO60888 179 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 ADRB2P07550 413 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 NTHL1P78549 312 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 RAB33AQ14088 237 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 E2F4Q16254 413 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 PDILTQ8N807 584 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 KIF12Q96FN5 646 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 PANK2Q9BZ23 570 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 CPSF3Q9UKF6 684 aaKnown RBP17.7■□□□□ 0.42
CPA4-205ENST00000474254 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 STYXL1Q9Y6J8 313 aa17.7■□□□□ 0.42
CPA4-205ENST00000474254 TISP43B9A030 160 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 ANKRD63C9JTQ0 380 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 SYN3O14994 580 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 LMNAP02545 664 aaKnown RBP17.69■□□□□ 0.42
CPA4-205ENST00000474254 CYP3A5P20815 502 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 LRPAP1P30533 357 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 OR1D2P34982 312 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 SPAG1Q07617 926 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 ZBTB6Q15916 424 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
CPA4-205ENST00000474254 PARM1Q6UWI2 310 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 RSPO2Q6UXX9 243 aaPredicted RBP17.69■□□□□ 0.42
CPA4-205ENST00000474254 FGF13Q92913 245 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 FGF14Q92915 247 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 SUSD3Q96L08 255 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 TSPAN18Q96SJ8 248 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 MRPL44Q9H9J2 332 aaKnown RBP17.69■□□□□ 0.42
CPA4-205ENST00000474254 RPF1Q9H9Y2 349 aaKnown RBP17.69■□□□□ 0.42
CPA4-205ENST00000474254 UBQLN1Q9UMX0 589 aaKnown RBP17.69■□□□□ 0.42
CPA4-205ENST00000474254 CDY1Q9Y6F8 540 aa17.69■□□□□ 0.42
CPA4-205ENST00000474254 LACTBL1A8MY62 500 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms