RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ACSF2Q96CM8 615 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-203ENST00000474056 CHAMP1Q96JM3 812 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 TRIM9Q9C026 710 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 PIDD1Q9HB75 910 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 LIMD1Q9UGP4 676 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 CFAP45Q9UL16 551 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 EXOC7Q9UPT5 735 aa19.49■□□□□ 0.71
UPF3A-203ENST00000474056 POLR2DO15514 142 aaKnown RBP19.48■□□□□ 0.71
UPF3A-203ENST00000474056 XPOTO43592 962 aaKnown RBP19.48■□□□□ 0.71
UPF3A-203ENST00000474056 TBC1D4O60343 1298 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 PRPF6O94906 941 aaKnown RBP19.48■□□□□ 0.71
UPF3A-203ENST00000474056 ROR1Q01973 937 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 MRPL58Q14197 206 aaKnown RBP19.48■□□□□ 0.71
UPF3A-203ENST00000474056 SPATA1Q5VX52 437 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 RESP18Q5W5W9 173 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 TRIM67Q6ZTA4 783 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 OTOP3Q7RTS5 596 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 CD302Q8IX05 232 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 PLCD3Q8N3E9 789 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 SLC7A14Q8TBB6 771 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 SORCS3Q9UPU3 1222 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 PCDHB13Q9Y5F0 798 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 KMT2EQ8IZD2 1858 aa19.48■□□□□ 0.71
UPF3A-203ENST00000474056 ZDBF2Q9HCK1 2354 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 WDR27A2RRH5 827 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 ASIC1P78348 528 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 SIGLEC14Q08ET2 396 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 ALCAMQ13740 583 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 TMEM132DQ14C87 1099 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 POSTNQ15063 836 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 PPM1LQ5SGD2 360 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 SLC8B1Q6J4K2 584 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 GLIS3Q8NEA6 775 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 BEST2Q8NFU1 509 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 TSPAN18Q96SJ8 248 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 LRRC27Q9C0I9 530 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 SMOC2Q9H3U7 446 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 FAM13BQ9NYF5 915 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 FBXL5Q9UKA1 691 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 RCOR1Q9UKL0 485 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 PCDHB8Q9UN66 801 aa19.47■□□□□ 0.71
UPF3A-203ENST00000474056 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-203ENST00000474056 TMEM221A6NGB7 291 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 H7C4K7 107 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 M0QZQ0 153 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 M0R296 226 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 CCL16O15467 120 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 CASP1P29466 404 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 GBP2P32456 591 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-203ENST00000474056 AARSP49588 968 aaKnown RBP eCLIP19.46■□□□□ 0.71
UPF3A-203ENST00000474056 AMPD3Q01432 767 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 CTXN3Q4LDR2 81 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 ZNF280DQ6N043 979 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 EFCAB13Q8IY85 973 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 SYCP3Q8IZU3 236 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 SAAL1Q96ER3 474 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 MYADMQ96S97 322 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 ASB7Q9H672 318 aa19.46■□□□□ 0.71
UPF3A-203ENST00000474056 TIMM13Q9Y5L4 95 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-203ENST00000474056 HNRNPA1P09651 372 aaKnown RBP eCLIP19.45■□□□□ 0.7
UPF3A-203ENST00000474056 HOXA9P31269 272 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 ARPP19P56211 112 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 WNT7BP56706 349 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 NTHL1P78549 312 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 MTMR3Q13615 1198 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 CNNM4Q6P4Q7 775 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 GET4Q7L5D6 327 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-203ENST00000474056 GRASPQ7Z6J2 395 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-203ENST00000474056 APPL2Q8NEU8 664 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 ASIC4Q96FT7 647 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 C7orf25Q9BPX7 421 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 CBWD1Q9BRT8 395 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 MAGEF1Q9HAY2 307 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 DERAQ9Y315 318 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 HCN4Q9Y3Q4 1203 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 C2CD2Q9Y426 696 aa19.45■□□□□ 0.7
UPF3A-203ENST00000474056 ABLIM3O94929 683 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 GARTP22102 1010 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 POU5F1Q01860 360 aaKnown RBP19.44■□□□□ 0.7
UPF3A-203ENST00000474056 UVSSAQ2YD98 709 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 C9orf57Q5W0N0 161 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 DSTYKQ6XUX3 929 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 ZNF461Q8TAF7 563 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 FAM213AQ9BRX8 229 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 BLZF1Q9H2G9 400 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 PCIF1Q9H4Z3 704 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 TMEM206Q9H813 350 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 POLIQ9UNA4 740 aa19.44■□□□□ 0.7
UPF3A-203ENST00000474056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-203ENST00000474056 ANO9A1A5B4 782 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 GOLGA8IPA6NC78 632 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 GOLGA8JA6NMD2 632 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 PIRO00625 290 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 SPTLC1O15269 473 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 XYLBO75191 536 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 LILRA4P59901 499 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 KRT85P78386 507 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 YWHAHQ04917 246 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms