RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 RALGAPA1Q6GYQ0 2036 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 K7ESF4 209 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 SLC30A4O14863 429 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 MYL4P12829 197 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 CDR1P51861 262 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 TWF1Q12792 350 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 ZNF174Q15697 407 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 DCAF4L1Q3SXM0 396 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 HEATR6Q6AI08 1181 aaKnown RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 RTL10Q7L3V2 364 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 DAW1Q8N136 415 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 SHKBP1Q8TBC3 707 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 ZSCAN18Q8TBC5 510 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 SMARCD2Q92925 531 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 BORCS6Q96GS4 357 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 ACO2Q99798 780 aaKnown RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 TARS2Q9BW92 718 aaKnown RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 LRRC3Q9BY71 257 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 FAM126AQ9BYI3 521 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-209ENST00000473421 SEMA4GQ9NTN9 838 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 TNFSF13BQ9Y275 285 aa13.85□□□□□ -0.19
TRAF4-209ENST00000473421 SLC38A8A6NNN8 435 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 HEPACAM2A8MVW5 462 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 MAN2B1O00754 1011 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 OR4Q2P0C623 313 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 PSMC3P17980 439 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 RPA1P27694 616 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 ELF1P32519 619 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 GRM5P41594 1212 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 NBR1Q14596 966 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 CCDC6Q16204 474 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 ST3GAL2Q16842 350 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 CTXN3Q4LDR2 81 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 LAIR1Q6GTX8 287 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 PDZD4Q76G19 769 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-209ENST00000473421 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
TRAF4-209ENST00000473421 ZFYVE19Q96K21 471 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 UROC1Q96N76 676 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 DNAJC25Q9H1X3 360 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
TRAF4-209ENST00000473421 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-209ENST00000473421 PDCD11Q14690 1871 aaKnown RBP13.84□□□□□ -0.19
TRAF4-209ENST00000473421 CNOT1A5YKK6 2376 aaKnown RBP13.83□□□□□ -0.19
TRAF4-209ENST00000473421 LAMA1P25391 3075 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 K7ERI5 159 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 RETP07949 1114 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 SDHBP21912 280 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 NPTX2P47972 431 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 CXCL12P48061 93 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 EPHA5P54756 1037 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 SPAG1Q07617 926 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-209ENST00000473421 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 PRR23CQ6ZRP0 262 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 TMC8Q8IU68 726 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 TTC9BQ8N6N2 239 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 IRF7Q92985 503 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 GTF3C6Q969F1 213 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 TBC1D32Q96NH3 1257 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 TRPV5Q9NQA5 729 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 POLR3BQ9NW08 1133 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-209ENST00000473421 TUBGCP4Q9UGJ1 667 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
TRAF4-209ENST00000473421 SFI1A8K8P3 1242 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 ZNF263O14978 683 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
TRAF4-209ENST00000473421 SOAT2O75908 522 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 MICAL2O94851 1124 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 KCNE1P15382 129 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 PROZP22891 400 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 CCR3P51677 355 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 PEX3P56589 373 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 MAPK7Q13164 816 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 PTGDRQ13258 359 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 SF3A2Q15428 464 aaKnown RBP13.82□□□□□ -0.2
TRAF4-209ENST00000473421 SLC10A6Q3KNW5 377 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 ZNF568Q3ZCX4 644 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 CYP4A22Q5TCH4 519 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 MFSD6LQ8IWD5 586 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 FAM160A2Q8N612 972 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-209ENST00000473421 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 NETO1Q8TDF5 533 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 WASF1Q92558 559 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 DDX12PQ92771 950 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 PGLYRP2Q96PD5 576 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 HAPLN2Q9GZV7 340 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 TRPV4Q9HBA0 871 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 BRMS1Q9HCU9 246 aa13.82□□□□□ -0.2
TRAF4-209ENST00000473421 ATG2BQ96BY7 2078 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 CACNA1GO43497 2377 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 KIF26AQ9ULI4 1882 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-209ENST00000473421 A0A1W2PRU2 124 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 CCDC169A6NNP5 214 aa13.81□□□□□ -0.2
TRAF4-209ENST00000473421 PP2D1A8MPX8 630 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms