RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CLIC4Q9Y696 253 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 PDCD11Q14690 1871 aaKnown RBP24.55■■□□□ 1.52
C9orf3-213ENST00000471978 LACTBL1A8MY62 500 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 GFRA3O60609 400 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 PIGRP01833 764 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 RHOP08100 348 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 MARCKSP29966 332 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-213ENST00000471978 DDIT3P35638 169 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 ZBTB6Q15916 424 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 ZBTB41Q5SVQ8 909 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 TPGS2Q68CL5 300 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 ZNF280DQ6N043 979 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 NPAS3Q8IXF0 933 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 TCEAL8Q8IYN2 117 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 DTWD2Q8NBA8 298 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 ING5Q8WYH8 240 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 CCSER1Q9C0I3 900 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 UBQLN1Q9UMX0 589 aaKnown RBP24.54■■□□□ 1.52
C9orf3-213ENST00000471978 PCDHB8Q9UN66 801 aa24.54■■□□□ 1.52
C9orf3-213ENST00000471978 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-213ENST00000471978 OGTO15294 1046 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 FAM189A1O60320 539 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 PTPN2P17706 415 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 CYP3A5P20815 502 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 LRPAP1P30533 357 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 GPC5P78333 572 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 ENOX2Q16206 610 aaKnown RBP24.53■■□□□ 1.52
C9orf3-213ENST00000471978 SPECC1Q5M775 1068 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 EPSTI1Q96J88 318 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 MSTO1Q9BUK6 570 aa24.53■■□□□ 1.52
C9orf3-213ENST00000471978 RPF1Q9H9Y2 349 aaKnown RBP24.53■■□□□ 1.52
C9orf3-213ENST00000471978 WDR87Q6ZQQ6 2873 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 NOTCH4Q99466 2003 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 A0A0B4J269 797 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 PROB1E7EW31 1015 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 SEC24AO95486 1093 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 NMT1P30419 496 aaKnown RBP24.52■■□□□ 1.52
C9orf3-213ENST00000471978 ABCD1P33897 745 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 GTF2BQ00403 316 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 PTPAQ15257 358 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 SLC5A9Q2M3M2 681 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 PHLDB3Q6NSJ2 640 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 USP49Q70CQ1 688 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 FIZ1Q96SL8 496 aa24.52■■□□□ 1.52
C9orf3-213ENST00000471978 AVENQ9NQS1 362 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-213ENST00000471978 CFAP54Q96N23 3096 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 M0QZQ0 153 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 XPOTO43592 962 aaKnown RBP24.51■■□□□ 1.51
C9orf3-213ENST00000471978 NBL1P41271 181 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 SLC39A4Q6P5W5 647 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 MAP4K3Q8IVH8 894 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 KRI1Q8N9T8 703 aaKnown RBP24.51■■□□□ 1.51
C9orf3-213ENST00000471978 FAM212AQ96EL1 285 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 MCRS1Q96EZ8 462 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 TSPAN18Q96SJ8 248 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 KXD1Q9BQD3 176 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 CORO1BQ9BR76 489 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 GDE1Q9NZC3 331 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 CCDC39Q9UFE4 941 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 INSL5Q9Y5Q6 135 aa24.51■■□□□ 1.51
C9orf3-213ENST00000471978 CPB1P15086 417 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 SYT1P21579 422 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 GUCY2FP51841 1108 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 YWHAHQ04917 246 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-213ENST00000471978 ADCY1Q08828 1119 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 RESTQ13127 1097 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 ANGPT1Q15389 498 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 AFF4Q9UHB7 1163 aaKnown RBP24.5■■□□□ 1.51
C9orf3-213ENST00000471978 FBXO2Q9UK22 296 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-213ENST00000471978 CPSF3Q9UKF6 684 aaKnown RBP24.5■■□□□ 1.51
C9orf3-213ENST00000471978 MAFFQ9ULX9 164 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 SIT1Q9Y3P8 196 aa24.5■■□□□ 1.51
C9orf3-213ENST00000471978 TIMM13Q9Y5L4 95 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-213ENST00000471978 SRPRBQ9Y5M8 271 aaKnown RBP24.5■■□□□ 1.51
C9orf3-213ENST00000471978 MYH15Q9Y2K3 1946 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 ADRB2P07550 413 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 CEBPBP17676 345 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 AARSP49588 968 aaKnown RBP eCLIP24.49■■□□□ 1.51
C9orf3-213ENST00000471978 ZC2HC1CQ53FD0 456 aaPredicted RBP24.49■■□□□ 1.51
C9orf3-213ENST00000471978 FAM173BQ6P4H8 233 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 DSTYKQ6XUX3 929 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 CD302Q8IX05 232 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 ELMOD1Q8N336 334 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 SHDQ96IW2 340 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 STK17AQ9UEE5 414 aa24.49■■□□□ 1.51
C9orf3-213ENST00000471978 ANKRD63C9JTQ0 380 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 OAZ2O95190 189 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 DCNP07585 359 aaKnown RBP24.48■■□□□ 1.51
C9orf3-213ENST00000471978 CEBPZQ03701 1054 aaKnown RBP24.48■■□□□ 1.51
C9orf3-213ENST00000471978 SNW1Q13573 536 aaKnown RBP24.48■■□□□ 1.51
C9orf3-213ENST00000471978 SPATA1Q5VX52 437 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 JADE1Q6IE81 842 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 RNF19BQ6ZMZ0 732 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 DYMQ7RTS9 669 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 FRMD5Q7Z6J6 570 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 USP37Q86T82 979 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 BEST2Q8NFU1 509 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 CLIC6Q96NY7 704 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 ST6GALNAC4Q9H4F1 302 aa24.48■■□□□ 1.51
C9orf3-213ENST00000471978 ZNF197O14709 1029 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms