RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 OVOS2A0A0J9YW53 1432 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 OVOS2Q6IE36 1432 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 COL24A1Q17RW2 1714 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 A0A088AWK7 358 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 DBX1A6NMT0 343 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 PLSCR1O15162 318 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 FRS3O43559 492 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 ARIH2O95376 493 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 RPL13P26373 211 aaKnown RBP6.94□□□□□ -1.3
CKS1B-204ENST00000471245 IL13P35225 146 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 SLC6A9P48067 706 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 TM4SF4P48230 202 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 AK2P54819 239 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 RAB1AP62820 205 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 NOGQ13253 232 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 CNN3Q15417 329 aaKnown RBP6.94□□□□□ -1.3
CKS1B-204ENST00000471245 KCNA10Q16322 511 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 RNF220Q5VTB9 566 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 TOGARAM2Q6ZUX3 1019 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 Q6ZVL8 140 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 MAEAQ7L5Y9 396 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 MORC1Q86VD1 984 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 RTKN2Q8IZC4 609 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 C3orf20Q8ND61 904 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 NAA15Q9BXJ9 866 aaKnown RBP6.94□□□□□ -1.3
CKS1B-204ENST00000471245 C14orf93Q9H972 538 aaKnown RBP6.94□□□□□ -1.3
CKS1B-204ENST00000471245 TAGLN3Q9UI15 199 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 RGPD5Q99666 1765 aa6.94□□□□□ -1.3
CKS1B-204ENST00000471245 ARHGEF28Q8N1W1 1705 aaKnown RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 ATP7BP35670 1465 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 IFRD1O00458 451 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 MTSS1O43312 755 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 PEX2P28328 305 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 MEOX1P50221 254 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 RAB39AQ14964 217 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 PTF1AQ7RTS3 328 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 TMEFF1Q8IYR6 380 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 TCP11L2Q8N4U5 519 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 MSL3Q8N5Y2 521 aaKnown RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 OR7D4Q8NG98 312 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 FNIP1Q8TF40 1166 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 LRTOMTQ8WZ04 291 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 MTFMTQ96DP5 389 aaKnown RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 TNIP3Q96KP6 325 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 MRGPRX4Q96LA9 322 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 L2HGDHQ9H9P8 463 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 NLRC4Q9NPP4 1024 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 CALCOCO1Q9P1Z2 691 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 CNOT6Q9ULM6 557 aaKnown RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 SIK3Q9Y2K2 1263 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 CTDP1Q9Y5B0 961 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-204ENST00000471245 ADGRB1O14514 1584 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 QSER1Q2KHR3 1735 aa6.93□□□□□ -1.3
CKS1B-204ENST00000471245 PAPPAQ13219 1627 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 RFXAPO00287 272 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 MGEA5O60502 916 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 PQBP1O60828 265 aaKnown RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 GASTP01350 101 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 ADSLP30566 484 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 CRHR1P34998 444 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 SREBF1P36956 1147 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 ALDH5A1P51649 535 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 NKX6-1P78426 367 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 TARDBPQ13148 414 aaKnown RBP eCLIP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 POLD3Q15054 466 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 CCDC157Q569K6 752 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 SWSAP1Q6NVH7 229 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 Q6ZUG5 572 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 TMEM151BQ8IW70 566 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 NGDNQ8NEJ9 315 aaKnown RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 CLPTM1LQ96KA5 538 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 TOX2Q96NM4 488 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 BTBD1Q9H0C5 482 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 NUP62CLQ9H1M0 184 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 TLR9Q9NR96 1032 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 LANCL2Q9NS86 450 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 POGKQ9P215 609 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 TRPS1Q9UHF7 1281 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 KCTD3Q9Y597 815 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 PCDHGB6Q9Y5F9 930 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 EIF3AQ14152 1382 aaKnown RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 COL18A1P39060 1754 aa6.92□□□□□ -1.3
CKS1B-204ENST00000471245 COL5A2P05997 1499 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-204ENST00000471245 NHSQ6T4R5 1651 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 LINC00310P59036 64 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 DLX2Q07687 328 aaPredicted RBP6.91□□□□□ -1.3
CKS1B-204ENST00000471245 PCOLCEQ15113 449 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 LONRF1Q17RB8 773 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 TSHZ1Q6ZSZ6 1077 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 SAPCD2Q86UD0 394 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 PLA2G15Q8NCC3 412 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms