RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CEP72Q9P209 647 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 VWA8A3KMH1 1905 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 NID2Q14112 1375 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 I3L4J1 428 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 ZBTB39O15060 712 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 TBX3O15119 743 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 HYAL3O43820 417 aaPredicted RBP13.24□□□□□ -0.29
LSM2-209ENST00000470083 SLC37A4O43826 429 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 ATG13O75143 517 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 RHOBTB1O94844 696 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 PRKCBP05771 671 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 MYL4P12829 197 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 CLCNKBP51801 687 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 NLRP5P59047 1200 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 EPHA7Q15375 998 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 UPP1Q16831 310 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 TPGS2Q68CL5 300 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 KIAA1211LQ6NV74 962 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 CAMKK1Q8N5S9 505 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 SHKBP1Q8TBC3 707 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 UROC1Q96N76 676 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
LSM2-209ENST00000470083 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
LSM2-209ENST00000470083 GTSE1Q9NYZ3 720 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 RGL1Q9NZL6 768 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
LSM2-209ENST00000470083 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
LSM2-209ENST00000470083 N4BP3O15049 544 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 DGAT1O75907 488 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 ARPP19P56211 112 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 TWF1Q12792 350 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 KARSQ15046 597 aaKnown RBP13.23□□□□□ -0.29
LSM2-209ENST00000470083 FAM187BQ17R55 369 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 ARHGAP29Q52LW3 1261 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 HAUS6Q7Z4H7 955 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 PROSER1Q86XN7 944 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 C3orf58Q8NDZ4 430 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 PPP1R10Q96QC0 940 aaKnown RBP13.23□□□□□ -0.29
LSM2-209ENST00000470083 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 ANO2Q9NQ90 1003 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 MAFFQ9ULX9 164 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
LSM2-209ENST00000470083 H7C4K7 107 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 M0R2N6 131 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 SYN3O14994 580 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 KHNYNO15037 678 aaKnown RBP13.22□□□□□ -0.29
LSM2-209ENST00000470083 ZIC2O95409 532 aaPredicted RBP13.22□□□□□ -0.29
LSM2-209ENST00000470083 BRCC3P46736 316 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 CYP4A11Q02928 519 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 CTTNQ14247 550 aaKnown RBP13.22□□□□□ -0.29
LSM2-209ENST00000470083 NTRK3Q16288 839 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 DIEXFQ68CQ4 756 aaKnown RBP13.22□□□□□ -0.29
LSM2-209ENST00000470083 PDZD3Q86UT5 571 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 ARID3BQ8IVW6 561 aaPredicted RBP13.22□□□□□ -0.29
LSM2-209ENST00000470083 DEFB124Q8NES8 71 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 DYDC2Q96IM9 177 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 LRRC3BQ96PB8 259 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 SLC26A6Q9BXS9 759 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 FZD8Q9H461 694 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 AFF4Q9UHB7 1163 aaKnown RBP13.22□□□□□ -0.29
LSM2-209ENST00000470083 FBXL5Q9UKA1 691 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 KLK13Q9UKR3 277 aa13.22□□□□□ -0.29
LSM2-209ENST00000470083 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 CACNA1EQ15878 2313 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 LRRIQ4A6NIV6 560 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 FGD1P98174 961 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 MRPL58Q14197 206 aaKnown RBP13.21□□□□□ -0.29
LSM2-209ENST00000470083 ADCK5Q3MIX3 580 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 TMEM196Q5HYL7 178 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
LSM2-209ENST00000470083 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 ADPGKQ9BRR6 497 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.29
LSM2-209ENST00000470083 OBP2AQ9NY56 170 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 ANKFY1Q9P2R3 1169 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 GDAQ9Y2T3 454 aa13.21□□□□□ -0.29
LSM2-209ENST00000470083 DPYSL4O14531 572 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 DCLK1O15075 740 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 LYPLA2O95372 231 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 CAPNS1P04632 268 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 IFNAR1P17181 557 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 TNK2Q07912 1038 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
LSM2-209ENST00000470083 INF2Q27J81 1249 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 ITPRIPL2Q3MIP1 535 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
LSM2-209ENST00000470083 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms