RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 CHRNB1P11230 501 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 AXLP30530 894 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 HOXC13P31276 330 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 OR1G1P47890 313 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 TOB1P50616 345 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 CREB5Q02930 508 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 PPM1LQ5SGD2 360 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 LIN9Q5TKA1 542 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 EEF1DP3Q658K8 133 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 SLC27A1Q6PCB7 646 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 NPAS3Q8IXF0 933 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 MCRS1Q96EZ8 462 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 PAAF1Q9BRP4 392 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 POLR3CQ9BUI4 534 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 CCDC113Q9H0I3 377 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 CCDC86Q9H6F5 360 aaKnown RBP12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 PCDHB6Q9Y5E3 794 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
ARHGEF39-202ENST00000468876 A0A1B0GUA9 196 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 SPAARA0A1B0GVQ0 90 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 J3QKU1 62 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 PTGESO14684 152 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 XYLBO75191 536 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 PAPSS2O95340 614 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 CAVIN2O95810 425 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 LIG1P18858 919 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 RPA1P27694 616 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 SIM1P81133 766 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 PTGDRQ13258 359 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 PCBP1Q15365 356 aaKnown RBP eCLIP12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 Q6ZS52 159 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 CHCHD4Q8N4Q1 142 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 PIK3R5Q8WYR1 880 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 UBL7Q96S82 380 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 RAXQ9Y2V3 346 aa12.85□□□□□ -0.35
ARHGEF39-202ENST00000468876 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 ARHGEF35A5YM69 484 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 C1QL1O75973 258 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 RECQL4O94761 1208 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 CAPNS1P04632 268 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 PRKCBP05771 671 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 HNRNPA1P09651 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 CYP11B2P19099 503 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 CCNE1P24864 410 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 DSG1Q02413 1049 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 IL17AQ16552 155 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 TANGO2Q6ICL3 276 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 FAM184AQ8NB25 1140 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 TRMT61BQ9BVS5 477 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 BHMT2Q9H2M3 363 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 FZD8Q9H461 694 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 PRMT7Q9NVM4 692 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 KANSL3Q9P2N6 904 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 PARP2Q9UGN5 583 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 GIT1Q9Y2X7 761 aa12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 MRPS23Q9Y3D9 190 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-202ENST00000468876 ZMYM2Q9UBW7 1377 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 CASTOR2A6NHX0 329 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 MAP3K13O43283 966 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 KIF4AO95239 1232 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 C1RP00736 705 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 IGFBP6P24592 240 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 CDC25AP30304 524 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 GRIK3Q13003 919 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 GNL2Q13823 731 aaKnown RBP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 ELF2Q15723 593 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 FUT10Q6P4F1 479 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 LILRA6Q6PI73 481 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 KCNK18Q7Z418 384 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 ZBTB8OSQ8IWT0 167 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 DAW1Q8N136 415 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 IRF7Q92985 503 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 NACC1Q96RE7 527 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 UBN1Q9NPG3 1134 aa12.83□□□□□ -0.36
ARHGEF39-202ENST00000468876 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms