RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.88□□□□□ -0.99
BRCA1-208ENST00000468300 RPF1Q9H9Y2 349 aaKnown RBP8.88□□□□□ -0.99
BRCA1-208ENST00000468300 SNTG2Q9NY99 539 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 TAS2R14Q9NYV8 317 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 TRPV2Q9Y5S1 764 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 CYP26A1O43174 497 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 CCP110O43303 1012 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 AXLP30530 894 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 CDK7P50613 346 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 GUCY2FP51841 1108 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 AP3M2P53677 418 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 MBTPS1Q14703 1052 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 DUOXA2Q1HG44 320 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 DCAF4L1Q3SXM0 396 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 NOTUMQ6P988 496 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 FAM212AQ96EL1 285 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 SCLT1Q96NL6 688 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 ASB7Q9H672 318 aa8.88□□□□□ -0.99
BRCA1-208ENST00000468300 BZW2Q9Y6E2 419 aaKnown RBP8.88□□□□□ -0.99
BRCA1-208ENST00000468300 MEIS3P2A8K0S8 358 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 MGEA5O60502 916 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 ZNF132P52740 706 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 MFAP3P55082 362 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 NOP14P78316 857 aaKnown RBP8.87□□□□□ -0.99
BRCA1-208ENST00000468300 PTPN11Q06124 597 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-208ENST00000468300 PTK7Q13308 1070 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 GPNMBQ14956 572 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 ZNF710Q8N1W2 664 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 SDCBP2Q9H190 292 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 TRPV6Q9H1D0 765 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 RNF19AQ9NV58 838 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 CNTN3Q9P232 1028 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 CABYRO75952 493 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 CFHP08603 1231 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 KRT83P78385 493 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 TFAMQ00059 246 aaKnown RBP8.87□□□□□ -0.99
BRCA1-208ENST00000468300 FMO1Q01740 532 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 BIRC3Q13489 604 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 CUL2Q13617 745 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 SURF1Q15526 300 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 NAB2Q15742 525 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 TDRD12Q587J7 1177 aaKnown RBP8.87□□□□□ -0.99
BRCA1-208ENST00000468300 GLYCTKQ8IVS8 523 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 GSTCDQ8NEC7 633 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 ACAP3Q96P50 834 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 ZSWIM1Q9BR11 485 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 IFIH1Q9BYX4 1025 aaKnown RBP8.87□□□□□ -0.99
BRCA1-208ENST00000468300 ERVK-5Q9HDB9 667 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 ST3GAL5Q9UNP4 418 aa8.87□□□□□ -0.99
BRCA1-208ENST00000468300 GOLGA6L9A6NEM1 432 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 AKR1B10O60218 316 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 CTSHP09668 335 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 CYP11B1P15538 503 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 AKAP5P24588 427 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 DSC3Q14574 896 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 BMS1Q14692 1282 aaKnown RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 LPIN1Q14693 890 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 FAM47CQ5HY64 1035 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 FBXO47Q5MNV8 452 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 JAKMIP2Q96AA8 810 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 AGPAT1Q99943 283 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 BCO2Q9BYV7 579 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PIN4Q9Y237 131 aaKnown RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 C2CD2Q9Y426 696 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 IPPQ9Y573 584 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 ATP8B3O60423 1300 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PPEF2O14830 753 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 MMEP08473 750 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 ANXA13P27216 316 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 AFF1P51825 1210 aaKnown RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 KYAT1Q16773 422 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 ZNF618Q5T7W0 954 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 VRTNQ9H8Y1 702 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PLEKHA5Q9HAU0 1116 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PUF60Q9UHX1 559 aaKnown RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 OGDHLQ9ULD0 1010 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 POLIQ9UNA4 740 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 CAPN6Q9Y6Q1 641 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 TANC1Q9C0D5 1861 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 RECQL4O94761 1208 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 IGFBP6P24592 240 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 THPOP40225 353 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PUS10Q3MIT2 529 aaKnown RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 ENOSF1Q7L5Y1 443 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 SLC35F6Q8N357 371 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 WHAMMQ8TF30 809 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 C18orf25Q96B23 403 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-208ENST00000468300 C1orf112Q9NSG2 853 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 TUBGCP4Q9UGJ1 667 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 DNAI1Q9UI46 699 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 NME7Q9Y5B8 376 aa8.86□□□□□ -0.99
BRCA1-208ENST00000468300 BTNL10A8MVZ5 291 aa8.85□□□□□ -0.99
BRCA1-208ENST00000468300 PTGESO14684 152 aa8.85□□□□□ -0.99
BRCA1-208ENST00000468300 CD4P01730 458 aa8.85□□□□□ -0.99
BRCA1-208ENST00000468300 ITGB3P05106 788 aa8.85□□□□□ -0.99
BRCA1-208ENST00000468300 CKBP12277 381 aa8.85□□□□□ -0.99
BRCA1-208ENST00000468300 ATF7P17544 494 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-208ENST00000468300 MAGEA1P43355 309 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms