RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 SIX4Q9UIU6 781 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 AGAP1Q9UPQ3 857 aa16.4■□□□□ 0.22
SNIP1-202ENST00000468040 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
SNIP1-202ENST00000468040 LRRC10BA6NIK2 292 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 KIF4AO95239 1232 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 DNAJB2P25686 324 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 TAP1Q03518 808 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 MYO1EQ12965 1108 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 NCOA4Q13772 614 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 PPP2R2DQ66LE6 453 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 SLC39A11Q8N1S5 342 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 FBXL13Q8NEE6 735 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 TIFAQ96CG3 184 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 FAM84AQ96KN4 292 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 TGS1Q96RS0 853 aaKnown RBP16.39■□□□□ 0.21
SNIP1-202ENST00000468040 PAAF1Q9BRP4 392 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 IMPG2Q9BZV3 1241 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 NDST4Q9H3R1 872 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 SPG21Q9NZD8 308 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
SNIP1-202ENST00000468040 PES1O00541 588 aaKnown RBP16.38■□□□□ 0.21
SNIP1-202ENST00000468040 TADA2AO75478 443 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 RB1P06400 928 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 ATICP31939 592 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 CTNNB1P35222 781 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 BMPR1AP36894 532 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 PBX3P40426 434 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 TAF6P49848 677 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 COPB1P53618 953 aaKnown RBP16.38■□□□□ 0.21
SNIP1-202ENST00000468040 SV2CQ496J9 727 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 FILIP1LQ4L180 1135 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 MIIPQ5JXC2 388 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 CCDC150Q8NCX0 1101 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 TAF4BQ92750 862 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 TMEM169Q96HH4 297 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 IGSF21Q96ID5 467 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 MARCH5Q9NX47 278 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 STK39Q9UEW8 545 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 ADAM28Q9UKQ2 775 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 KIAA1671Q9BY89 1806 aa16.38■□□□□ 0.21
SNIP1-202ENST00000468040 GTPBP10A4D1E9 387 aaKnown RBP16.37■□□□□ 0.21
SNIP1-202ENST00000468040 C5orf67F2Z3F1 127 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 VNN1O95497 513 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 STAU1O95793 577 aaKnown RBP16.37■□□□□ 0.21
SNIP1-202ENST00000468040 SERPINC1P01008 464 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
SNIP1-202ENST00000468040 HLA-DRAP01903 254 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 LILRA4P59901 499 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 ERVK-21P61565 698 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 KRT17Q04695 432 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 ELAVL2Q12926 359 aaKnown RBP16.37■□□□□ 0.21
SNIP1-202ENST00000468040 SGSM1Q2NKQ1 1148 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 FKBP15Q5T1M5 1219 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 C3orf58Q8NDZ4 430 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 TAS1R2Q8TE23 839 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 HPDLQ96IR7 371 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 C11orf84Q9BUA3 381 aaPredicted RBP16.37■□□□□ 0.21
SNIP1-202ENST00000468040 RBSNQ9H1K0 784 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 VPS16Q9H269 839 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 RAB20Q9NX57 234 aa16.37■□□□□ 0.21
SNIP1-202ENST00000468040 SF3B1O75533 1304 aaKnown RBP eCLIP16.37■□□□□ 0.214e-8■■■■■ 68.9
SNIP1-202ENST00000468040 ARHGEF37A1IGU5 675 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 LGALS16A8MUM7 142 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 NT5C1B-RDH14C9J2C7 533 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 PPEF2O14830 753 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 CLSTN1O94985 981 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 ARHGEF15O94989 841 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 AARSP49588 968 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNIP1-202ENST00000468040 MYL6P60660 151 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 ZNF699Q32M78 642 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 APTXQ7Z2E3 356 aaKnown RBP16.36■□□□□ 0.21
SNIP1-202ENST00000468040 TMEM173Q86WV6 379 aaPredicted RBP16.36■□□□□ 0.21
SNIP1-202ENST00000468040 TMEM130Q8N3G9 435 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 HASPINQ8TF76 798 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 XYLT2Q9H1B5 865 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 VRTNQ9H8Y1 702 aa16.36■□□□□ 0.21
SNIP1-202ENST00000468040 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 RANBP2P49792 3224 aaKnown RBP16.35■□□□□ 0.21
SNIP1-202ENST00000468040 TMEM265A0A087WTH1 108 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 KPNA7A9QM74 516 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 F8W810 466 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 FGF18O76093 207 aa16.35■□□□□ 0.21
SNIP1-202ENST00000468040 ASS1P00966 412 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms