RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RPS6P62753 249 aaKnown RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 DLG4P78352 724 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 UBE3AQ05086 875 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 KIAA0753Q2KHM9 967 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 TCERG1LQ5VWI1 586 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 RNF207Q6ZRF8 634 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 ZNF605Q86T29 641 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 FAM9BQ8IZU0 186 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 CELF2-AS1Q8N7Q2 184 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 TMEM105Q8N8V8 129 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 OR6P1Q8NGX9 317 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 PPTC7Q8NI37 304 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 BAHD1Q8TBE0 780 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 ZNF689Q96CS4 500 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 BORCS6Q96GS4 357 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 KCNC2Q96PR1 638 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 IWS1Q96ST2 819 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 INCENPQ9NQS7 918 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 CNOT6Q9ULM6 557 aaKnown RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 KIAA1217Q5T5P2 1943 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 EP300Q09472 2414 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-207ENST00000467273 GSG1L2A8MUP6 293 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 ARIH2O95376 493 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 GLP2RO95838 553 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 LMNAP02545 664 aaKnown RBP6.31□□□□□ -1.4
PTCD3-207ENST00000467273 HPXP02790 462 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 SLC3A2P08195 630 aaKnown RBP6.31□□□□□ -1.4
PTCD3-207ENST00000467273 GNAT1P11488 350 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 HOXB8P17481 243 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-207ENST00000467273 ATP5JP18859 108 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 PLCG1P19174 1290 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 MCCP23508 829 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 CALML3P27482 149 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 RING1Q06587 406 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 CAMK1Q14012 370 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 KCNV1Q6PIU1 500 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 TMEM184AQ6ZMB5 413 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 KREMEN2Q8NCW0 462 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 ZNF507Q8TCN5 953 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 ATP8B4Q8TF62 1192 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 PPP1R13LQ8WUF5 828 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 DCAF4Q8WV16 495 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 CLEC4DQ8WXI8 215 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 COPS5Q92905 334 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 KIF1BPQ96EK5 621 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 NEK1Q96PY6 1258 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 STRBPQ96SI9 672 aaKnown RBP6.31□□□□□ -1.4
PTCD3-207ENST00000467273 HAUS7Q99871 368 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 SIRPGQ9P1W8 387 aa6.31□□□□□ -1.4
PTCD3-207ENST00000467273 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
PTCD3-207ENST00000467273 CEP250Q9BV73 2442 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 CACNA1GO43497 2377 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 PKD1L2Q7Z442 2459 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 TRIM13O60858 407 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 DNAJA2O60884 412 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 EIF3JO75822 258 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 DGKIO75912 1065 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 PDGFBP01127 241 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 RPLP2P05387 115 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 IFIT2P09913 472 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 NRIP1P48552 1158 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 NOVP48745 357 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 STXBP2Q15833 593 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 PPP2R5EQ16537 467 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 LY6KQ17RY6 165 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ZC3H14Q6PJT7 736 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 SLC30A10Q6XR72 485 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 KCTD1Q719H9 257 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 CCDC105Q8IYK2 499 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 CMTR2Q8IYT2 770 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 SPPL3Q8TCT6 385 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 NSUN6Q8TEA1 469 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ATP6V0A1Q93050 837 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 NECTIN4Q96NY8 510 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 RTP3Q9BQQ7 232 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ALG1Q9BT22 464 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ADAMTS10Q9H324 1103 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 MFSD1Q9H3U5 465 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 TLE6Q9H808 572 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 FBRSQ9HAH7 460 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ACTR10Q9NZ32 417 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 TTC3P53804 2025 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 ATRXP46100 2492 aa6.3□□□□□ -1.4
PTCD3-207ENST00000467273 TLDC2A0PJX2 215 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 C17orf102A2RUQ5 167 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 ITGB1P05556 798 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 PGRP06401 933 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 TGFB3P10600 412 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 AOC1P19801 751 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 TDO2P48775 406 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 TFAP4Q01664 338 aa6.29□□□□□ -1.4
PTCD3-207ENST00000467273 KCNC3Q14003 757 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms