RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MCRS1Q96EZ8 462 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 ZNF512Q96ME7 567 aaPredicted RBP19.06■□□□□ 0.64
COL7A1-206ENST00000466591 DNMT3BQ9UBC3 853 aaKnown RBP19.06■□□□□ 0.64
COL7A1-206ENST00000466591 FBXL5Q9UKA1 691 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 PCDHB8Q9UN66 801 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 SIT1Q9Y3P8 196 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 VWA8A3KMH1 1905 aa19.06■□□□□ 0.64
COL7A1-206ENST00000466591 TRIP11Q15643 1979 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 KRBA1A5PL33 1030 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 ZNF197O14709 1029 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 ATF2P15336 505 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 NPR3P17342 541 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 ADCY1Q08828 1119 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 ANGPT1Q15389 498 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 CD300LGQ6UXG3 332 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 SLC2A4RGQ9NR83 387 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 INSL5Q9Y5Q6 135 aa19.05■□□□□ 0.64
COL7A1-206ENST00000466591 ARHGEF37A1IGU5 675 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 LACTBL1A8MY62 500 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 TNFSF9P41273 254 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 GPC5P78333 572 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 SNW1Q13573 536 aaKnown RBP19.04■□□□□ 0.64
COL7A1-206ENST00000466591 RRAGBQ5VZM2 374 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 ADALQ6DHV7 355 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 DYMQ7RTS9 669 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 CD302Q8IX05 232 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 NPAS3Q8IXF0 933 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 KCNG4Q8TDN1 519 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 NKD2Q969F2 451 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-206ENST00000466591 OXCT2Q9BYC2 517 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-206ENST00000466591 FOXD4L1Q9NU39 408 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 GDE1Q9NZC3 331 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 CLIC4Q9Y696 253 aa19.04■□□□□ 0.64
COL7A1-206ENST00000466591 ABLIM3O94929 683 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 DCNP07585 359 aaKnown RBP19.03■□□□□ 0.64
COL7A1-206ENST00000466591 ODC1P11926 461 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 MYL4P12829 197 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 CYP3A5P20815 502 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 DDIT3P35638 169 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 GRIN1Q05586 938 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 TWF1Q12792 350 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 PLD1Q13393 1074 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 TMEM132DQ14C87 1099 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 SLFN12LQ6IEE8 588 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 ARMCX5Q6P1M9 558 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 FRMD5Q7Z6J6 570 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 TCEAL8Q8IYN2 117 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 TSPAN18Q96SJ8 248 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 CCSER1Q9C0I3 900 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 SLITRK6Q9H5Y7 841 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 ASAH2Q9NR71 780 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 BLOC1S4Q9NUP1 217 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 STK17AQ9UEE5 414 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 AFF4Q9UHB7 1163 aaKnown RBP19.03■□□□□ 0.64
COL7A1-206ENST00000466591 EXOC7Q9UPT5 735 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 TIMM13Q9Y5L4 95 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-206ENST00000466591 WDFY4Q6ZS81 3184 aa19.03■□□□□ 0.64
COL7A1-206ENST00000466591 PIEZO1Q92508 2521 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 TTC26A0AVF1 554 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 NMT1P30419 496 aaKnown RBP19.02■□□□□ 0.64
COL7A1-206ENST00000466591 UBXN2BQ14CS0 331 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 ENOX2Q16206 610 aaKnown RBP19.02■□□□□ 0.64
COL7A1-206ENST00000466591 PHLDB3Q6NSJ2 640 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 SV2BQ7L1I2 683 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 EPSTI1Q96J88 318 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 PGLYRP2Q96PD5 576 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 RPP25Q9BUL9 199 aaKnown RBP19.02■□□□□ 0.64
COL7A1-206ENST00000466591 MRPL44Q9H9J2 332 aaKnown RBP19.02■□□□□ 0.64
COL7A1-206ENST00000466591 MAFFQ9ULX9 164 aa19.02■□□□□ 0.64
COL7A1-206ENST00000466591 CEBPBP17676 345 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 LRPAP1P30533 357 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 STAT6P42226 847 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 ALDH1A3P47895 512 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 ACOT2P49753 483 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 ZNF131P52739 623 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 CUL4AQ13619 759 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 MLF2Q15773 248 aaPredicted RBP19.01■□□□□ 0.63
COL7A1-206ENST00000466591 OVOS1Q6IE37 1185 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 JADE1Q6IE81 842 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 CCDC73Q6ZRK6 1079 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 METTL23Q86XA0 190 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 MAP4K3Q8IVH8 894 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 SYCP3Q8IZU3 236 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 LEMD2Q8NC56 503 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 NOC3LQ8WTT2 800 aaKnown RBP19.01■□□□□ 0.63
COL7A1-206ENST00000466591 POMGNT1Q8WZA1 660 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 BCO2Q9BYV7 579 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 FOXQ1Q9C009 403 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 HAPLN2Q9GZV7 340 aa19.01■□□□□ 0.63
COL7A1-206ENST00000466591 AGO2Q9UKV8 859 aaKnown RBP19.01■□□□□ 0.63
COL7A1-206ENST00000466591 OR6C75A6NL08 312 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 SEC24AO95486 1093 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 PIGRP01833 764 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 HSP90AA1P07900 732 aaKnown RBP19■□□□□ 0.63
COL7A1-206ENST00000466591 IDEP14735 1019 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 SYT1P21579 422 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 NBL1P41271 181 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 GUCY2FP51841 1108 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 EPHB3P54753 998 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 GTF2BQ00403 316 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms