RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 RANBP2P49792 3224 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 SSU72P8A0A1W2PR75 194 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 CES2O00748 559 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 OGTO15294 1046 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 XPOTO43592 962 aaKnown RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 RECQL4O94761 1208 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 CLTAP09496 248 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 LAG3P18627 525 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 GARTP22102 1010 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PROZP22891 400 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PPM1AP35813 382 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PBX2P40425 430 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PRCPP42785 496 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 MTIF2P46199 727 aaKnown RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 PLA2G4AP47712 749 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 MCL1Q07820 350 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 EHHADHQ08426 723 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 NNTQ13423 1086 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PPP2R5EQ16537 467 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 EEF1DP3Q658K8 133 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 EMBQ6PCB8 327 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 THNSL1Q8IYQ7 743 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 ZNF507Q8TCN5 953 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 CPLX3Q8WVH0 158 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 LPPQ93052 612 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 SECISBP2LQ93073 1101 aaKnown RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 ZNF689Q96CS4 500 aaPredicted RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 CEP63Q96MT8 703 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 DEF6Q9H4E7 631 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 ZNF576Q9H609 170 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PTPRHQ9HD43 1115 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 SLC38A7Q9NVC3 462 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.78□□□□□ -0.686e-9■■■■■ 30.1
PMF1-204ENST00000466489 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 AGO2Q9UKV8 859 aaKnown RBP10.78□□□□□ -0.68
PMF1-204ENST00000466489 PLAGL2Q9UPG8 496 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 GDAQ9Y2T3 454 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 HES2Q9Y543 173 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 KIAA1671Q9BY89 1806 aa10.78□□□□□ -0.68
PMF1-204ENST00000466489 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 LINC01553A4QN01 128 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 ARL5CA6NH57 179 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 SOWAHDA6NJG2 315 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 CALUO43852 315 aaPredicted RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 KLRC4O43908 158 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 RB1P06400 928 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 CCDC172P0C7W6 258 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 OAS2P29728 719 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 CTNNB1P35222 781 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 ACTN2P35609 894 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 MLH1P40692 756 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 ALDH7A1P49419 539 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 CASP5P51878 434 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 VAV2P52735 878 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 OSTNP61366 133 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 GRIK3Q13003 919 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 KNOP1Q1ED39 458 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 BMT2Q1RMZ1 405 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 RAD9BQ6WBX8 426 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 AGMOQ6ZNB7 445 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 TRAPPC11Q7Z392 1133 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 ZNF572Q7Z3I7 529 aaPredicted RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 VPS36Q86VN1 386 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 CD302Q8IX05 232 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 C1orf131Q8NDD1 294 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 HPS3Q969F9 1004 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 ZNF558Q96NG5 402 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 TSPAN18Q96SJ8 248 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 GAD1Q99259 594 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 C11orf84Q9BUA3 381 aaPredicted RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 STRA6Q9BX79 667 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 PLVAPQ9BX97 442 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 VPS16Q9H269 839 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 RPF1Q9H9Y2 349 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 RC3H2Q9HBD1 1191 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 KIAA1586Q9HCI6 787 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 SNTG2Q9NY99 539 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 YBX2Q9Y2T7 364 aaKnown RBP10.77□□□□□ -0.69
PMF1-204ENST00000466489 ATP8B3O60423 1300 aa10.77□□□□□ -0.69
PMF1-204ENST00000466489 A0A0B4J269 797 aa10.76□□□□□ -0.69
PMF1-204ENST00000466489 GOLGA8KD6RF30 607 aa10.76□□□□□ -0.69
PMF1-204ENST00000466489 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
PMF1-204ENST00000466489 INPPL1O15357 1258 aa10.76□□□□□ -0.69
PMF1-204ENST00000466489 TEX33O43247 280 aa10.76□□□□□ -0.69
PMF1-204ENST00000466489 ZC3H11AO75152 810 aaKnown RBP eCLIP10.76□□□□□ -0.69
PMF1-204ENST00000466489 LCA5LO95447 670 aa10.76□□□□□ -0.69
PMF1-204ENST00000466489 EDN1P05305 212 aa10.76□□□□□ -0.69
PMF1-204ENST00000466489 THP07101 528 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms