RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RPN1P04843 607 aaKnown RBP13.99□□□□□ -0.17
COL5A1-206ENST00000465877 WNT7BP56706 349 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 FAM160A1Q05DH4 1040 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 DPYDQ12882 1025 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 STK4Q13043 487 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 HS2ST1Q7LGA3 356 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 FMR1NBQ8N0W7 255 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-206ENST00000465877 LNX1Q8TBB1 728 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-206ENST00000465877 FBXL18Q96ME1 805 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 SFXN1Q9H9B4 322 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 AGPAT3Q9NRZ7 376 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 HSPBP1Q9NZL4 362 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 CHMP5Q9NZZ3 219 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 PPEF2O14830 753 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL5A1-206ENST00000465877 ZP2Q05996 745 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 PSMD2Q13200 908 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 SNW1Q13573 536 aaKnown RBP13.98□□□□□ -0.17
COL5A1-206ENST00000465877 RARS2Q5T160 578 aaKnown RBP13.98□□□□□ -0.17
COL5A1-206ENST00000465877 NT5DC4Q86YG4 428 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 SUSD6Q92537 303 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 CCDC47Q96A33 483 aaKnown RBP13.98□□□□□ -0.17
COL5A1-206ENST00000465877 CCDC34Q96HJ3 373 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 SUSD3Q96L08 255 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 S1PR5Q9H228 398 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 MTRRQ9UBK8 725 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 PRKAG3Q9UGI9 489 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 CDH22Q9UJ99 828 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 TRIOO75962 3097 aa13.98□□□□□ -0.17
COL5A1-206ENST00000465877 CLIC2O15247 247 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 TGM5O43548 720 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 RHOBTB3O94955 611 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 CYP2J2P51589 502 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 SNRPFP62306 86 aaKnown RBP13.97□□□□□ -0.17
COL5A1-206ENST00000465877 ITIH3Q06033 890 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 PNOCQ13519 176 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 CBX2Q14781 532 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-206ENST00000465877 KNOP1Q1ED39 458 aaKnown RBP13.97□□□□□ -0.17
COL5A1-206ENST00000465877 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
COL5A1-206ENST00000465877 C9orf57Q5W0N0 161 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 ZNF280DQ6N043 979 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 KANK3Q6NY19 840 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 ELMSAN1Q6PJG2 1045 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 ANKS3Q6ZW76 656 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 PALB2Q86YC2 1186 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 CBWD2Q8IUF1 395 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 ADHFE1Q8IWW8 467 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 C12orf76Q8N812 135 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-206ENST00000465877 ENGASEQ8NFI3 743 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
COL5A1-206ENST00000465877 CLSTN3Q9BQT9 956 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 FBXW11Q9UKB1 542 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 CDY1Q9Y6F8 540 aa13.97□□□□□ -0.17
COL5A1-206ENST00000465877 PTPRJQ12913 1337 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 DOCK8Q8NF50 2099 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 ANO9A1A5B4 782 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 M0QZQ0 153 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 TNFRSF10AO00220 468 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 ADAM12O43184 909 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 C1RP00736 705 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
COL5A1-206ENST00000465877 KCNB1Q14721 858 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 SNRNP35Q16560 246 aaKnown RBP13.96□□□□□ -0.17
COL5A1-206ENST00000465877 CES5AQ6NT32 575 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 GOLGA5Q8TBA6 731 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 FAM84AQ96KN4 292 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 ADAM7Q9H2U9 754 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 KIAA1586Q9HCI6 787 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 PDE11AQ9HCR9 933 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 DPP3Q9NY33 737 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 CGNQ9P2M7 1197 aaKnown RBP13.96□□□□□ -0.17
COL5A1-206ENST00000465877 DPP7Q9UHL4 492 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 BACE2Q9Y5Z0 518 aa13.96□□□□□ -0.17
COL5A1-206ENST00000465877 DOCK6Q96HP0 2047 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 ZNF233A6NK53 670 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 PIRO00625 290 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-206ENST00000465877 ITGB3P05106 788 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 TMEM191BP0C7N4 346 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 SPATA31D3P0C874 917 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 ODC1P11926 461 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 LILRA4P59901 499 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 ROR1Q01973 937 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-206ENST00000465877 RSPO2Q6UXX9 243 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-206ENST00000465877 TMC5Q6UXY8 1006 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 SPATA31D4Q6ZUB0 917 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 XXYLT1Q8NBI6 393 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 CMASQ8NFW8 434 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-206ENST00000465877 FEZF2Q8TBJ5 459 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 HDAC7Q8WUI4 952 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 RIPOR3Q96MK2 946 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 NECTIN4Q96NY8 510 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 MTMR12Q9C0I1 747 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 KCTD10Q9H3F6 313 aa13.95□□□□□ -0.18
COL5A1-206ENST00000465877 PLEKHA4Q9H4M7 779 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms