RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 SLC6A4P31645 630 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 PTH2RP49190 550 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 SIM1P81133 766 aaPredicted RBP7.29□□□□□ -1.24
SSB-207ENST00000465871 MRPS35P82673 323 aaKnown RBP7.29□□□□□ -1.24
SSB-207ENST00000465871 RSPH3Q86UC2 560 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 LNX2Q8N448 690 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 BOLLQ8N9W6 283 aaKnown RBP7.29□□□□□ -1.24
SSB-207ENST00000465871 FAM98AQ8NCA5 519 aaKnown RBP7.29□□□□□ -1.24
SSB-207ENST00000465871 SSH3Q8TE77 659 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 RAB24Q969Q5 203 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 HDAC10Q969S8 669 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 LRIT1Q9P2V4 623 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
SSB-207ENST00000465871 COL11A2P13942 1736 aaPredicted RBP7.28□□□□□ -1.24
SSB-207ENST00000465871 SGTAO43765 313 aa7.28□□□□□ -1.24
SSB-207ENST00000465871 MT-CO1P00395 513 aa7.28□□□□□ -1.24
SSB-207ENST00000465871 ELLP55199 621 aaPredicted RBP7.28□□□□□ -1.24
SSB-207ENST00000465871 Q8NA96 180 aa7.28□□□□□ -1.24
SSB-207ENST00000465871 IFI44Q8TCB0 444 aa7.28□□□□□ -1.24
SSB-207ENST00000465871 ACTRT2Q8TDY3 377 aa7.28□□□□□ -1.24
SSB-207ENST00000465871 RSAD1Q9HA92 442 aa7.28□□□□□ -1.24
SSB-207ENST00000465871 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 MGST3O14880 152 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 GRM6O15303 877 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 MTHFD1P11586 935 aaKnown RBP7.27□□□□□ -1.25
SSB-207ENST00000465871 C5AR1P21730 350 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 ACAP2Q15057 778 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 PABPC1LQ4VXU2 614 aaKnown RBP7.27□□□□□ -1.25
SSB-207ENST00000465871 SP5Q6BEB4 398 aaPredicted RBP7.27□□□□□ -1.25
SSB-207ENST00000465871 FOXJ2Q9P0K8 574 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 PCDHA13Q9Y5I0 950 aa7.27□□□□□ -1.25
SSB-207ENST00000465871 A0A1W2PS29 197 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 RARRES1P49788 294 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 ABCB5Q2M3G0 1257 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 ZNF362Q5T0B9 420 aaPredicted RBP7.26□□□□□ -1.25
SSB-207ENST00000465871 SYDE2Q5VT97 1194 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.26□□□□□ -1.25
SSB-207ENST00000465871 FAXDC2Q96IV6 333 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 PDLIM2Q96JY6 352 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 LRFN3Q9BTN0 628 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 TLR10Q9BXR5 811 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 KIAA1586Q9HCI6 787 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 ADARB2Q9NS39 739 aaKnown RBP7.26□□□□□ -1.25
SSB-207ENST00000465871 IPPQ9Y573 584 aa7.26□□□□□ -1.25
SSB-207ENST00000465871 KLHL33A6NCF5 533 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 AGFG2O95081 481 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 SBK3P0C264 359 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 KRT85P78386 507 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 PACSIN1Q9BY11 444 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.25□□□□□ -1.25
SSB-207ENST00000465871 TRHDEQ9UKU6 1024 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 CDYLQ9Y232 598 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 TNFRSF18Q9Y5U5 241 aa7.25□□□□□ -1.25
SSB-207ENST00000465871 HTRA2O43464 458 aaPredicted RBP7.24□□□□□ -1.25
SSB-207ENST00000465871 XPOTO43592 962 aaKnown RBP7.24□□□□□ -1.25
SSB-207ENST00000465871 PEX1O43933 1283 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 PCDHGA12O60330 932 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 C1RP00736 705 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 CD1AP06126 327 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 MYBL2P10244 700 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 ZNF37AP17032 561 aaPredicted RBP7.24□□□□□ -1.25
SSB-207ENST00000465871 IL12RB1P42701 662 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 CACNA2D1P54289 1103 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 KRTAP1-1Q07627 177 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 RAB39AQ14964 217 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 COLEC12Q5KU26 742 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 RNF187Q5TA31 235 aaPredicted RBP7.24□□□□□ -1.25
SSB-207ENST00000465871 UTP14CQ5TAP6 766 aaKnown RBP7.24□□□□□ -1.25
SSB-207ENST00000465871 IL17RDQ8NFM7 739 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 JKAMPQ9P055 326 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 LIMCH1Q9UPQ0 1083 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 NEU2Q9Y3R4 380 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 PCDHGA9Q9Y5G4 932 aaKnown RBP7.24□□□□□ -1.25
SSB-207ENST00000465871 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 PCDHGA3Q9Y5H0 932 aa7.24□□□□□ -1.25
SSB-207ENST00000465871 PRAMEF33A0A0G2JMD5 474 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 FZD9O00144 591 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 PRAMEF10O60809 474 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 KCNA2P16389 499 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 ZNF280AP59817 542 aaPredicted RBP7.23□□□□□ -1.25
SSB-207ENST00000465871 MTMR1Q13613 665 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 SF3B3Q15393 1217 aaKnown RBP7.23□□□□□ -1.25
SSB-207ENST00000465871 C3orf36Q3SXR2 165 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 ZNF365Q70YC5 407 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 CLNKQ7Z7G1 428 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 TMEM125Q96AQ2 219 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 MRGPRX4Q96LA9 322 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 TEKT5Q96M29 485 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 HEPHQ9BQS7 1158 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 SPATA5L1Q9BVQ7 753 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 SEMA4GQ9NTN9 838 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 MRFAP1Q9Y605 127 aa7.23□□□□□ -1.25
SSB-207ENST00000465871 ARHGEF17Q96PE2 2063 aaPredicted RBP7.23□□□□□ -1.25
SSB-207ENST00000465871 SHTN1A0MZ66 631 aa7.22□□□□□ -1.25
SSB-207ENST00000465871 IGLV2-14P01704 120 aa7.22□□□□□ -1.25
SSB-207ENST00000465871 SRGNP10124 158 aa7.22□□□□□ -1.25
SSB-207ENST00000465871 EDNRBP24530 442 aa7.22□□□□□ -1.25
SSB-207ENST00000465871 FOLR3P41439 243 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms