RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 DLGAP2Q9P1A6 1054 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 C2CD2Q9Y426 696 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 TROVE2P10155 538 aaKnown RBP eCLIP20.93■□□□□ 0.94
SDF4-205ENST00000465727 CA4P22748 312 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 RPS6KA3P51812 740 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 MCCD1P59942 119 aaPredicted RBP20.93■□□□□ 0.94
SDF4-205ENST00000465727 C1orf220Q5T0J3 134 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 HHATQ5VTY9 493 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 OR52E8Q6IFG1 317 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 SLC51AQ86UW1 340 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 PPM1KQ8N3J5 372 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 QSER1Q2KHR3 1735 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 K7ENM7 598 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 MYBL1P10243 752 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 ADRA2BP18089 450 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 KRT15P19012 456 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 VPS41P49754 854 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 SNRPFP62306 86 aaKnown RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 CTC1Q2NKJ3 1217 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 CYP4F22Q6NT55 531 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 XXYLT1Q8NBI6 393 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 TRIM11Q96F44 468 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 DDX27Q96GQ7 796 aaKnown RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 SLC24A2Q9UI40 661 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 F5H6K3 240 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 C6orf229H3BNL8 230 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 KCNQ2O43526 872 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 TYROBPO43914 113 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 BRD2P25440 801 aaKnown RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 KLRC2P26717 231 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 RPA3P35244 121 aaPredicted RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 LLGL1Q15334 1064 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 RBM26Q5T8P6 1007 aaKnown RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 SNX30Q5VWJ9 437 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 OTOAQ7RTW8 1153 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 SLC5A5Q92911 643 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 GJD4Q96KN9 370 aaPredicted RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 BTBD10Q9BSF8 475 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 TMEM117Q9H0C3 514 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 MMADHCQ9H3L0 296 aaPredicted RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 GRID1Q9ULK0 1009 aa20.92■□□□□ 0.94
SDF4-205ENST00000465727 R3HDM2Q9Y2K5 976 aaKnown RBP20.92■□□□□ 0.94
SDF4-205ENST00000465727 NDC80O14777 642 aa20.91■□□□□ 0.94
SDF4-205ENST00000465727 RAD21O60216 631 aa20.91■□□□□ 0.94
SDF4-205ENST00000465727 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
SDF4-205ENST00000465727 CLEC16AQ2KHT3 1053 aa20.91■□□□□ 0.94
SDF4-205ENST00000465727 KHDC1Q4VXA5 237 aaKnown RBP20.91■□□□□ 0.94
SDF4-205ENST00000465727 ACCSQ96QU6 501 aa20.91■□□□□ 0.94
SDF4-205ENST00000465727 LARSQ9P2J5 1176 aaKnown RBP20.91■□□□□ 0.94
SDF4-205ENST00000465727 ANKFY1Q9P2R3 1169 aa20.91■□□□□ 0.94
SDF4-205ENST00000465727 PSTPIP1O43586 416 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 ZBED4O75132 1171 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 UPP2O95045 317 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 USH1GQ495M9 461 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 ZC3H12AQ5D1E8 599 aaKnown RBP20.9■□□□□ 0.94
SDF4-205ENST00000465727 DDX1Q92499 740 aaKnown RBP20.9■□□□□ 0.94
SDF4-205ENST00000465727 ZNF75CPQ92670 426 aaPredicted RBP20.9■□□□□ 0.94
SDF4-205ENST00000465727 MIPEPQ99797 713 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 HERPUD2Q9BSE4 406 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 WDR11Q9BZH6 1224 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 FAM192AQ9GZU8 254 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 PCIF1Q9H4Z3 704 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 ARHGEF35A5YM69 484 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 ZBTB39O15060 712 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 CHMP2AO43633 222 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 ADSSP30520 456 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 RFC5P40937 340 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 SLC34A1Q06495 639 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 PKN2Q16513 984 aaKnown RBP20.9■□□□□ 0.94
SDF4-205ENST00000465727 SLC5A9Q2M3M2 681 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 MTDHQ86UE4 582 aaKnown RBP20.9■□□□□ 0.94
SDF4-205ENST00000465727 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 PPFIBP2Q8ND30 876 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 BICD1Q96G01 975 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 CADM1Q9BY67 442 aaKnown RBP20.9■□□□□ 0.94
SDF4-205ENST00000465727 SAYSD1Q9NPB0 183 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 HSPBP1Q9NZL4 362 aa20.9■□□□□ 0.94
SDF4-205ENST00000465727 MAGEA13PA6NCF6 341 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 GRIN3BO60391 1043 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 GAS7O60861 476 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 RALAP11233 206 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 RCN2Q14257 317 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 SLC1A5Q15758 541 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 GSTA3Q16772 222 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 P3H1Q32P28 736 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 PRUNE1Q86TP1 453 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 WDR18Q9BV38 432 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 TIPINQ9BVW5 301 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 TRIM4Q9C037 500 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 SYNCQ9H7C4 482 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 PSMC3IPQ9P2W1 217 aaPredicted RBP20.89■□□□□ 0.93
SDF4-205ENST00000465727 FETUBQ9UGM5 382 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 DNALI1O14645 258 aaPredicted RBP20.89■□□□□ 0.93
SDF4-205ENST00000465727 RCN1Q15293 331 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 VPS72Q15906 364 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 PCNX4Q63HM2 1172 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 LRRC74BQ6ZQY2 392 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 SMIM5Q71RC9 77 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 DAW1Q8N136 415 aa20.89■□□□□ 0.93
SDF4-205ENST00000465727 SCG3Q8WXD2 468 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms