RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 FCER1AP12319 257 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 FOLR3P41439 243 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 ATXN1P54253 815 aaKnown RBP6.93□□□□□ -1.3
SMC4-205ENST00000465563 CTXN1P60606 82 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 SF3B3Q15393 1217 aaKnown RBP6.93□□□□□ -1.3
SMC4-205ENST00000465563 RHOT1Q8IXI2 618 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 AMOTL1Q8IY63 956 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 Q8NA96 180 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 NRG4Q8WWG1 115 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 INO80BQ9C086 356 aaPredicted RBP6.93□□□□□ -1.3
SMC4-205ENST00000465563 INTUQ9ULD6 942 aa6.93□□□□□ -1.3
SMC4-205ENST00000465563 LRRC3CA6NJW4 275 aa6.92□□□□□ -1.3
SMC4-205ENST00000465563 K7ESF4 209 aa6.92□□□□□ -1.3
SMC4-205ENST00000465563 PROP1O75360 226 aa6.92□□□□□ -1.3
SMC4-205ENST00000465563 HAUS5O94927 633 aa6.92□□□□□ -1.3
SMC4-205ENST00000465563 CLSTN1O94985 981 aa6.92□□□□□ -1.3
SMC4-205ENST00000465563 VIL1P09327 827 aaKnown RBP6.92□□□□□ -1.3
SMC4-205ENST00000465563 GIMAP6Q6P9H5 292 aa6.92□□□□□ -1.3
SMC4-205ENST00000465563 YY2O15391 372 aa6.91□□□□□ -1.3
SMC4-205ENST00000465563 RBMXL2O75526 392 aaKnown RBP6.91□□□□□ -1.3
SMC4-205ENST00000465563 WASP42768 502 aa6.91□□□□□ -1.3
SMC4-205ENST00000465563 KLF1Q13351 362 aaPredicted RBP6.91□□□□□ -1.3
SMC4-205ENST00000465563 AKNAD1Q5T1N1 836 aa6.91□□□□□ -1.3
SMC4-205ENST00000465563 PPM1NQ8N819 430 aa6.91□□□□□ -1.3
SMC4-205ENST00000465563 ATL2Q8NHH9 583 aa6.91□□□□□ -1.3
SMC4-205ENST00000465563 SSH1Q8WYL5 1049 aa6.91□□□□□ -1.3
SMC4-205ENST00000465563 SAP30BPQ9UHR5 308 aaKnown RBP6.91□□□□□ -1.3
SMC4-205ENST00000465563 A0A1W2PS29 197 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 ORC4O43929 436 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 KIAA0895LQ68EN5 471 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 UROC1Q96N76 676 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 IL17RBQ9NRM6 502 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 INTS13Q9NVM9 706 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 ASB6Q9NWX5 421 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
SMC4-205ENST00000465563 CCDC151A5D8V7 595 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 TRIM75PA6NK02 468 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 MPPED1O15442 326 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 SRGNP10124 158 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 MTHFD1P11586 935 aaKnown RBP6.89□□□□□ -1.31
SMC4-205ENST00000465563 CLUL1Q15846 466 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 KAZNQ674X7 775 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 VWA1Q6PCB0 445 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 MIGA2Q7L4E1 593 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 GRASPQ7Z6J2 395 aaPredicted RBP6.89□□□□□ -1.31
SMC4-205ENST00000465563 CLNKQ7Z7G1 428 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 RSPH3Q86UC2 560 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 DCBLD1Q8N8Z6 715 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 TMEM125Q96AQ2 219 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 TDP1Q9NUW8 608 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 NEU2Q9Y3R4 380 aa6.89□□□□□ -1.31
SMC4-205ENST00000465563 PRAMEF33A0A0G2JMD5 474 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 GRM6O15303 877 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 PRAMEF10O60809 474 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 AGFG2O95081 481 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 KCNA2P16389 499 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 SLC6A4P31645 630 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
SMC4-205ENST00000465563 FPGSQ05932 587 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 FOXF2Q12947 444 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 PABPC1LQ4VXU2 614 aaKnown RBP6.88□□□□□ -1.31
SMC4-205ENST00000465563 UTP14CQ5TAP6 766 aaKnown RBP6.88□□□□□ -1.31
SMC4-205ENST00000465563 SRRM1Q8IYB3 904 aaKnown RBP6.88□□□□□ -1.31
SMC4-205ENST00000465563 FBXL20Q96IG2 436 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 TMX3Q96JJ7 454 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 TLR10Q9BXR5 811 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
SMC4-205ENST00000465563 CDYLQ9Y232 598 aa6.88□□□□□ -1.31
SMC4-205ENST00000465563 PHLDB1Q86UU1 1377 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 PROM1O43490 865 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 CDC42EP1Q00587 391 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 ZNF844Q08AG5 666 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 TARDBPQ13148 414 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMC4-205ENST00000465563 NBPF8Q3BBV2 869 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 TIMP4Q99727 224 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 ENTPD2Q9Y5L3 495 aa6.87□□□□□ -1.31
SMC4-205ENST00000465563 IL17RDQ8NFM7 739 aa6.86□□□□□ -1.31
SMC4-205ENST00000465563 SLC30A5Q8TAD4 765 aa6.86□□□□□ -1.31
SMC4-205ENST00000465563 RAB24Q969Q5 203 aa6.86□□□□□ -1.31
SMC4-205ENST00000465563 HDAC10Q969S8 669 aa6.86□□□□□ -1.31
SMC4-205ENST00000465563 NAF1Q96HR8 494 aaKnown RBP6.86□□□□□ -1.31
SMC4-205ENST00000465563 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
SMC4-205ENST00000465563 PCDHA13Q9Y5I0 950 aa6.86□□□□□ -1.31
SMC4-205ENST00000465563 SBK3P0C264 359 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 GATA3P23771 443 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 GRIA3P42263 894 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 MAPK10P53779 464 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 KRTAP10-11P60412 298 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 PGM2L1Q6PCE3 622 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 PEG10Q86TG7 708 aaKnown RBP6.85□□□□□ -1.31
SMC4-205ENST00000465563 GLCCI1Q86VQ1 547 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 IFI44Q8TCB0 444 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 TFAP2BQ92481 460 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 PACSIN1Q9BY11 444 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 TMX1Q9H3N1 280 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 CPNE5Q9HCH3 593 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 KMT5AQ9NQR1 393 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 JKAMPQ9P055 326 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 CTTNBP2NLQ9P2B4 639 aa6.85□□□□□ -1.31
SMC4-205ENST00000465563 NDUFS2O75306 463 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms