RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 DHX37Q8IY37 1157 aaKnown RBP9.08□□□□□ -0.96
ACTB-208ENST00000464611 MCOLN2Q8IZK6 566 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 ANKS4BQ8N8V4 417 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 CCDC89Q8N998 374 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 REPS2Q8NFH8 660 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 IPO4Q8TEX9 1081 aaKnown RBP9.08□□□□□ -0.96
ACTB-208ENST00000464611 ATP8B4Q8TF62 1192 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 SLC20A1Q8WUM9 679 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 TCP11Q8WWU5 503 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 CCDC127Q96BQ5 260 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 WNK4Q96J92 1243 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 CLMNQ96JQ2 1002 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 FAM167AQ96KS9 214 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 PCDHB18PQ96TA0 734 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 FRMD8P1Q9BZ68 369 aaPredicted RBP9.08□□□□□ -0.96
ACTB-208ENST00000464611 PHACTR1Q9C0D0 580 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 DPH5Q9H2P9 285 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 CENPHQ9H3R5 247 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 GOLPH3Q9H4A6 298 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 PCDHB8Q9UN66 801 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
ACTB-208ENST00000464611 ATP8A1Q9Y2Q0 1164 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 MAFBQ9Y5Q3 323 aaPredicted RBP9.08□□□□□ -0.96
ACTB-208ENST00000464611 SMCHD1A6NHR9 2005 aa9.08□□□□□ -0.96
ACTB-208ENST00000464611 MANSC4A6NHS7 340 aaPredicted RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 SMAPO00193 183 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 PROSCO94903 275 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 LSM8O95777 96 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 C4BPAP04003 597 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 CALB1P05937 261 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 MMEP08473 750 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 GHRP10912 638 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 PYGMP11217 842 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 KRT5P13647 590 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 MMP13P45452 471 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 GTF2A2P52657 109 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 POLGP54098 1239 aaPredicted RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 ACTR2P61160 394 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 MAGOHP61326 146 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 GUCY1A3Q02108 690 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 MCL1Q07820 350 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SREBF2Q12772 1141 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SPP2Q13103 211 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 NR1H3Q13133 447 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SNAPC2Q13487 334 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 MTMR2Q13614 643 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 PTK6Q13882 451 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 NEDD9Q14511 834 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 PPP1R7Q15435 360 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 TRADDQ15628 312 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 UGCGQ16739 394 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 ERMARDQ5T6L9 678 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SNRNP48Q6IEG0 339 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 DRICH1Q6PGQ1 229 aaPredicted RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 SLC30A10Q6XR72 485 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 CCDC121Q6ZUS5 278 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 CPLX4Q7Z7G2 160 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SLC47A2Q86VL8 602 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 KATNAL2Q8IYT4 538 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 RCOR2Q8IZ40 523 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 CACNA2D3Q8IZS8 1091 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 ABRAQ8N0Z2 381 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 CNPY4Q8N129 248 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 RIBC1Q8N443 379 aaPredicted RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 SH2D3CQ8N5H7 860 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 EXD1Q8NHP7 514 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 DEPTORQ8TB45 409 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 PLEKHO2Q8TD55 490 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 TAS1R2Q8TE23 839 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SLC7A3Q8WY07 619 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SEMA4DQ92854 862 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 SNF8Q96H20 258 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 RBM41Q96IZ5 413 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 CELF4Q9BZC1 486 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 PORCNQ9H237 461 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 NEUROG2Q9H2A3 272 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 DHX33Q9H6R0 707 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 PARVAQ9NVD7 372 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 GRHL1Q9NZI5 618 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 PKD2L1Q9P0L9 805 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.96
ACTB-208ENST00000464611 IP6K2Q9UHH9 426 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
ACTB-208ENST00000464611 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 EFR3BQ9Y2G0 817 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 AFG3L2Q9Y4W6 797 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 ACTL7BQ9Y614 415 aa9.07□□□□□ -0.96
ACTB-208ENST00000464611 IGKV6D-21A0A0A0MT36 114 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 GOLGA8IPA6NC78 632 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 GOLGA8JA6NMD2 632 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 RASGRF2O14827 1237 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 RIPK2O43353 540 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 SORBS3O60504 671 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 OATP04181 439 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 RARAP10276 462 aa9.06□□□□□ -0.96
ACTB-208ENST00000464611 TAL1P17542 331 aaPredicted RBP9.06□□□□□ -0.96
ACTB-208ENST00000464611 TNNI1P19237 187 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms