RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MTRRQ9UBK8 725 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 MTCL1Q9Y4B5 1905 aaKnown RBP14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 C2CD2LO14523 706 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 RHOBTB3O94955 611 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 CASP1P29466 404 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 KNOP1Q1ED39 458 aaKnown RBP14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 RTP2Q5QGT7 225 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 CES5AQ6NT32 575 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 ADHFE1Q8IWW8 467 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 C3orf58Q8NDZ4 430 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 GLIS3Q8NEA6 775 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 HPS3Q969F9 1004 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 CBWD1Q9BRT8 395 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 AGPAT3Q9NRZ7 376 aa14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 USP15Q9Y4E8 981 aaPredicted RBP14.17□□□□□ -0.14
R3HDM1-213ENST00000463230 M0QZQ0 153 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 MTHFRP42898 656 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 ENGASEQ8NFI3 743 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 RIPOR3Q96MK2 946 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 SLC39A2Q9NP94 309 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 RBAKQ9NYW8 714 aaPredicted RBP14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 MAFFQ9ULX9 164 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 PLXNA3P51805 1871 aa14.16□□□□□ -0.14
R3HDM1-213ENST00000463230 ANO9A1A5B4 782 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 ZNF233A6NK53 670 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 DLL1O00548 723 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 TGFB1I1O43294 461 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 NFICP08651 508 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 EPCAMP16422 314 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 MCM4P33991 863 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 MYBPC2Q14324 1141 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 LILRA6Q6PI73 481 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 CEP57Q86XR8 500 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 IKZF4Q9H2S9 585 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 RMND1Q9NWS8 449 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 HSPBP1Q9NZL4 362 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 TCF20Q9UGU0 1960 aaKnown RBP14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 POU2F2P09086 479 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 IL9P15248 144 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 TYMPP19971 482 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 PNPLA4P41247 253 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 RAB33AQ14088 237 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 MRPL58Q14197 206 aaKnown RBP14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 CLUL1Q15846 466 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 C9orf57Q5W0N0 161 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 C15orf39Q6ZRI6 1047 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 SAAL1Q96ER3 474 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 CLSTN3Q9BQT9 956 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 ZDHHC7Q9NXF8 308 aa14.15□□□□□ -0.14
R3HDM1-213ENST00000463230 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 PIRO00625 290 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 TKTP29401 623 aaKnown RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 BRCC3P46736 316 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 PRSS55Q6UWB4 352 aaPredicted RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 SLC9A9Q8IVB4 645 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 XXYLT1Q8NBI6 393 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 KIAA0895Q8NCT3 520 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 B3GALT6Q96L58 329 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 PHF7Q9BWX1 381 aaPredicted RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 DPP3Q9NY33 737 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 TNFRSF10AO00220 468 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 PDXKO00764 312 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 SMC2O95347 1197 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 HOXA9P31269 272 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 RBM10P98175 930 aaKnown RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 ZP2Q05996 745 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 SPAG1Q07617 926 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 STK4Q13043 487 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 SNW1Q13573 536 aaKnown RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 CBX2Q14781 532 aaPredicted RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 NFIL3Q16649 462 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 VARS2Q5ST30 1063 aaKnown RBP14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 ZNF560Q96MR9 790 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 GSDMAQ96QA5 445 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 PCIF1Q9H4Z3 704 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 MAN1C1Q9NR34 630 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 FBXW11Q9UKB1 542 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 DSEQ9UL01 958 aa14.14□□□□□ -0.15
R3HDM1-213ENST00000463230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 TBC1D4O60343 1298 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 ATAT1Q5SQI0 421 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 ZNF280DQ6N043 979 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 GPR149Q86SP6 731 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 NELFCDQ8IXH7 590 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 EFCAB13Q8IY85 973 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 TGM5O43548 720 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 OAZ2O95190 189 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 HNRNPA1P09651 372 aaKnown RBP eCLIP14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 ODC1P11926 461 aa14.13□□□□□ -0.15
R3HDM1-213ENST00000463230 TAF6P49848 677 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms