RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LIPIQ6XZB0 460 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 SYNE3Q6ZMZ3 975 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 SGMS1Q86VZ5 419 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 PROSER1Q86XN7 944 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 ZFPM1Q8IX07 1006 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 LLPHQ9BRT6 129 aaKnown RBP8.45□□□□□ -1.06
UBE4B-204ENST00000462658 BOCQ9BWV1 1114 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 RNF181Q9P0P0 153 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 B4GALT6Q9UBX8 382 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 PMF1-BGLAPU3KQ54 211 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 TNKSO95271 1327 aa8.45□□□□□ -1.06
UBE4B-204ENST00000462658 ADAMTSL1Q8N6G6 1762 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 PRAMEF25A6NGN4 478 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ZBTB43O43298 467 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 DHX16O60231 1041 aaKnown RBP8.44□□□□□ -1.06
UBE4B-204ENST00000462658 DTNBO60941 627 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ENTPD3O75355 529 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 TSPY3P0CV98 308 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 TSPY8P0CW00 308 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 TCP10Q12799 353 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ARHGAP44Q17R89 818 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 APOA5Q6Q788 366 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 RNF180Q86T96 592 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 RAB11FIP4Q86YS3 637 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 AHI1Q8N157 1196 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 SLC44A5Q8NCS7 719 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 DPF2Q92785 391 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ZBTB8AQ96BR9 441 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ZSWIM3Q96MP5 696 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 PWWP2AQ96N64 755 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 DHX36Q9H2U1 1008 aaKnown RBP8.44□□□□□ -1.06
UBE4B-204ENST00000462658 TMOD2Q9NZR1 351 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF70Q9UC06 446 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF541Q9H0D2 1346 aa8.44□□□□□ -1.06
UBE4B-204ENST00000462658 BAZ2AQ9UIF9 1905 aaKnown RBP8.44□□□□□ -1.06
UBE4B-204ENST00000462658 CLRN2A0PK11 232 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 DDTLA6NHG4 134 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 GOLGA8AA7E2F4 631 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 TCP10L2B9ZVM9 353 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 DVL2O14641 736 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 CPLX1O14810 134 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 NMT2O60551 498 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 JAK2O60674 1132 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 CTDNEP1O95476 244 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 THBS2P35442 1172 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 GMPSP49915 693 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 METAP2P50579 478 aaKnown RBP eCLIP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 ITGA1P56199 1179 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF280AP59817 542 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 C1QTNF8P60827 252 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 GABPAQ06546 454 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 PKP1Q13835 747 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 TMEM132BQ14DG7 1078 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 PHF19Q5T6S3 580 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 IFIT1BQ5T764 474 aaKnown RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 CD276Q5ZPR3 534 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 FAM177A1Q8N128 213 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 ENAHQ8N8S7 591 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 NSUN7Q8NE18 718 aaKnown RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 FNIP1Q8TF40 1166 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 DLG3Q92796 817 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 ZBED3Q96IU2 234 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 C11orf84Q9BUA3 381 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 MYOZ2Q9NPC6 264 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 NGRNQ9NPE2 291 aaKnown RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 TCP11L1Q9NUJ3 509 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 H2AFY2Q9P0M6 372 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 SWAP70Q9UH65 585 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 CNOT7Q9UIV1 285 aaKnown RBP8.43□□□□□ -1.06
UBE4B-204ENST00000462658 SERPINB13Q9UIV8 391 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 MAPRE3Q9UPY8 281 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 ZDHHC9Q9Y397 364 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 B3GALT1Q9Y5Z6 326 aa8.43□□□□□ -1.06
UBE4B-204ENST00000462658 SHTN1A0MZ66 631 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 WNT10BO00744 389 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 STX6O43752 255 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 HIP1RO75146 1068 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 F2P00734 622 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 ATP2A2P16615 1042 aaKnown RBP8.42□□□□□ -1.06
UBE4B-204ENST00000462658 RXRAP19793 462 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 PDCP20941 246 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 SYT1P21579 422 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 GJA4P35212 333 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 STAT3P40763 770 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 RCAN1P53805 252 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 HMGN5P82970 282 aaKnown RBP8.42□□□□□ -1.06
UBE4B-204ENST00000462658 ZNF385BQ569K4 471 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 FKBP1CQ5VVH2 108 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 CPLX2Q6PUV4 134 aaKnown RBP8.42□□□□□ -1.06
UBE4B-204ENST00000462658 CATIPQ7Z7H3 387 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 MICU3Q86XE3 530 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 DGKHQ86XP1 1220 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 FOXP4Q8IVH2 680 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-204ENST00000462658 FAM184AQ8NB25 1140 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 FAM151AQ8WW52 585 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 ANKS1AQ92625 1134 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 TNPO1Q92973 898 aaKnown RBP8.42□□□□□ -1.06
UBE4B-204ENST00000462658 ORAI3Q9BRQ5 295 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 MYL10Q9BUA6 226 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms