RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PPP2R3AQ06190 1150 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 MRPL58Q14197 206 aaKnown RBP16.78■□□□□ 0.28
SKA3-204ENST00000462482 IL17AQ16552 155 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 SLC5A9Q2M3M2 681 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 HYIQ5T013 277 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 KCNK18Q7Z418 384 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 TMEM161BQ8NDZ6 487 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 RUBCNQ92622 972 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 PLIN2Q99541 437 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 BRD9Q9H8M2 597 aa16.78■□□□□ 0.28
SKA3-204ENST00000462482 ABLIM1O14639 778 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 TBC1D4O60343 1298 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 GLULP15104 373 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 LIG4P49917 911 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 YWHAHQ04917 246 aaPredicted RBP16.77■□□□□ 0.28
SKA3-204ENST00000462482 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
SKA3-204ENST00000462482 MCL1Q07820 350 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 ADCY1Q08828 1119 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 PLD1Q13393 1074 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 SLC10A6Q3KNW5 377 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 ZNF528Q3MIS6 628 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 SEZ6Q53EL9 994 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.28
SKA3-204ENST00000462482 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 RASSF8Q8NHQ8 419 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 ATRIPQ8WXE1 791 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 DDX12PQ92771 950 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 DNASE1L2Q92874 299 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 TRMT61BQ9BVS5 477 aaKnown RBP16.77■□□□□ 0.28
SKA3-204ENST00000462482 ASAH2Q9NR71 780 aa16.77■□□□□ 0.28
SKA3-204ENST00000462482 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
SKA3-204ENST00000462482 PTPRZ1P23471 2315 aaPredicted RBP16.77■□□□□ 0.28
SKA3-204ENST00000462482 MAN2B1O00754 1011 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 SLC26A4O43511 780 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 SEC24AO95486 1093 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
SKA3-204ENST00000462482 CXCL8P10145 99 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 MYL4P12829 197 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 CD72P21854 359 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 UBA7P41226 1012 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 TWF1Q12792 350 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 IRF7Q92985 503 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 SECISBP2LQ93073 1101 aaKnown RBP16.76■□□□□ 0.27
SKA3-204ENST00000462482 AK8Q96MA6 479 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 PNMA5Q96PV4 448 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 TSPAN18Q96SJ8 248 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 KIF2CQ99661 725 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 GPR88Q9GZN0 384 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 SLITRK6Q9H5Y7 841 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
SKA3-204ENST00000462482 TUBGCP4Q9UGJ1 667 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 ODF2LQ9ULJ1 636 aa16.76■□□□□ 0.27
SKA3-204ENST00000462482 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
SKA3-204ENST00000462482 SPTLC1O15269 473 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 FAM13AO94988 1023 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 CYP3A5P20815 502 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 ABCD1P33897 745 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 PPP2R5DQ14738 602 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 FAM78AQ5JUQ0 283 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 PRSS36Q5K4E3 855 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 HAUS6Q7Z4H7 955 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 KIAA2013Q8IYS2 634 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 SMARCD2Q92925 531 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 TCEAL4Q96EI5 215 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 PLA2G2FQ9BZM2 168 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
SKA3-204ENST00000462482 HEBP1Q9NRV9 189 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 MTF2Q9Y483 593 aaPredicted RBP16.75■□□□□ 0.27
SKA3-204ENST00000462482 PCDHGA2Q9Y5H1 932 aa16.75■□□□□ 0.27
SKA3-204ENST00000462482 OR6C75A6NL08 312 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 BMP15O95972 392 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 PAX3P23760 479 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 GJB2P29033 226 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 LRPAP1P30533 357 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 RPS9P46781 194 aaKnown RBP16.74■□□□□ 0.27
SKA3-204ENST00000462482 ALDH1A3P47895 512 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 EPHB3P54753 998 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 NCKAP1LP55160 1127 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
SKA3-204ENST00000462482 SPAG1Q07617 926 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 GRM2Q14416 872 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 DHX8Q14562 1220 aaKnown RBP16.74■□□□□ 0.27
SKA3-204ENST00000462482 TMEM119Q4V9L6 283 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 GPBP1Q86WP2 473 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 YAF2Q8IY57 180 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 DEPDC1BQ8WUY9 529 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 ASB16Q96NS5 453 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 ZHX3Q9H4I2 956 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 SMC3Q9UQE7 1217 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 USP34Q70CQ2 3546 aa16.74■□□□□ 0.27
SKA3-204ENST00000462482 NPHP3-ACAD11A0A0J9YXS1 232 aa16.73■□□□□ 0.27
SKA3-204ENST00000462482 TTC26A0AVF1 554 aa16.73■□□□□ 0.27
SKA3-204ENST00000462482 K7ENM7 598 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms