RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 CATIPQ7Z7H3 387 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 CKAP2LQ8IYA6 745 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 C12orf76Q8N812 135 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-206ENST00000461574 MRPL43Q8N983 215 aaKnown RBP5.72□□□□□ -1.49
BRCA1-206ENST00000461574 CTCFLQ8NI51 663 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-206ENST00000461574 RIN2Q8WYP3 895 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-206ENST00000461574 RUBCNQ92622 972 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 SCLT1Q96NL6 688 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 DSCC1Q9BVC3 393 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 CWH43Q9H720 699 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 ERVK-5Q9HDB9 667 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 TCEAL9Q9UHQ7 104 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 DUSP12Q9UNI6 340 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 ST3GAL5Q9UNP4 418 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 USTQ9Y2C2 406 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 NOC2LQ9Y3T9 749 aaKnown RBP5.72□□□□□ -1.49
BRCA1-206ENST00000461574 R4GN57 208 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 CEP250Q9BV73 2442 aa5.72□□□□□ -1.49
BRCA1-206ENST00000461574 CHD6Q8TD26 2715 aa5.71□□□□□ -1.49
BRCA1-206ENST00000461574 FANCMQ8IYD8 2048 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 C9IYK1 514 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 MEIS2O14770 477 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 MAFGO15525 162 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CYTH3O43739 400 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CLASP2O75122 1294 aaKnown RBP5.71□□□□□ -1.5
BRCA1-206ENST00000461574 ZC3H11AO75152 810 aaKnown RBP eCLIP5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CXCL14O95715 111 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 VTNP04004 478 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 SLC26A2P50443 739 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 ACTR2P61160 394 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CDK5R2Q13319 367 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 GIT2Q14161 759 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 SEC23AQ15436 765 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 ZNF124Q15973 351 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 UBE2SQ16763 222 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 KIZQ2M2Z5 673 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 KIAA0319Q5VV43 1072 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 FAM160B1Q5W0V3 765 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CYB5R4Q7L1T6 521 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 TRMT1LQ7Z2T5 733 aaKnown RBP5.71□□□□□ -1.5
BRCA1-206ENST00000461574 PLD6Q8N2A8 252 aaKnown RBP5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CCDC82Q8N4S0 544 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 METTL13Q8N6R0 699 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 MRPL9Q9BYD2 267 aaKnown RBP5.71□□□□□ -1.5
BRCA1-206ENST00000461574 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 LNPKQ9C0E8 428 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 ELAC1Q9H777 363 aaKnown RBP5.71□□□□□ -1.5
BRCA1-206ENST00000461574 PSTPIP2Q9H939 334 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 SFXN1Q9H9B4 322 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 NCDNQ9UBB6 729 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 ACACBO00763 2458 aa5.71□□□□□ -1.5
BRCA1-206ENST00000461574 CHD8Q9HCK8 2581 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 COL1A2P08123 1366 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 CARNS1A5YM72 827 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 NT5C1B-RDH14C9J2C7 533 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 DDX39AO00148 427 aaKnown RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 HBP1O60381 514 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 KINO60870 393 aaKnown RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 EPCAMP16422 314 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 SDHBP21912 280 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 ITPKAP23677 461 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 CRYBB1P53674 252 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 BCAR1P56945 870 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 RNASELQ05823 741 aaKnown RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 SLC35G1Q2M3R5 365 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 CYP27C1Q4G0S4 372 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 ZNF484Q5JVG2 852 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 LRRC55Q6ZSA7 311 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 PLPPR4Q7Z2D5 763 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 FAM228AQ86W67 206 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 PPFIBP1Q86W92 1011 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 VPS52Q8N1B4 723 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 SLC39A11Q8N1S5 342 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 FAM181AQ8N9Y4 354 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 STAMQ92783 540 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 SECISBP2LQ93073 1101 aaKnown RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 WDR89Q96FK6 387 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-206ENST00000461574 CASD1Q96PB1 797 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 MAP7D2Q96T17 732 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 PCYT2Q99447 389 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 SPZ1Q9BXG8 430 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 KCNK12Q9HB15 430 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 JADE2Q9NQC1 790 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 KCNH7Q9NS40 1196 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 IGSF9Q9P2J2 1179 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 CA14Q9ULX7 337 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 PCDHA6Q9UN73 950 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 AKT3Q9Y243 479 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 PCDHA8Q9Y5H6 950 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 UBIAD1Q9Y5Z9 338 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 U3KQE9 123 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 WDR81Q562E7 1941 aa5.7□□□□□ -1.5
BRCA1-206ENST00000461574 PATJQ8NI35 1801 aa5.69□□□□□ -1.5
BRCA1-206ENST00000461574 TPRP12270 2363 aaKnown RBP5.69□□□□□ -1.5
BRCA1-206ENST00000461574 BIN1O00499 593 aa5.69□□□□□ -1.5
BRCA1-206ENST00000461574 TMPRSS2O15393 492 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms