RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TUBB4BP68371 445 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 GPC5P78333 572 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 CLDN10P78369 228 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 IRX5P78411 483 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 LACTBP83111 547 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 AMPD2Q01433 879 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 CDR2Q01850 454 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 PRKCZQ05513 592 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 C2orf54Q08AI8 447 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 TMEM132DQ14C87 1099 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 SGSM1Q2NKQ1 1148 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 DCAF4L1Q3SXM0 396 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ZNF667Q5HYK9 610 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 GNASQ5JWF2 1037 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 MARCH8Q5T0T0 291 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 JADE1Q6IE81 842 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 RUFY4Q6ZNE9 571 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 C15orf39Q6ZRI6 1047 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 MTERF4Q7Z6M4 381 aaKnown RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 KIAA0319LQ8IZA0 1049 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 LINC01465Q8N7H1 131 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 CEP120Q8N960 986 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 RBBP8NLQ8NC74 664 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 SLC30A5Q8TAD4 765 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 EPS8L1Q8TE68 723 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 DNAJB3Q8WWF6 145 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 RFFLQ8WZ73 363 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ANKRD7Q92527 254 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 RABGGTAQ92696 567 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 HHIPL1Q96JK4 782 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 CAPNS2Q96L46 248 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 ACAP3Q96P50 834 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 RHOXF2Q9BQY4 288 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 MTG1Q9BT17 334 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 SELENOOQ9BVL4 669 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 APOL6Q9BWW8 343 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 THAP2Q9H0W7 228 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 APOBEC3GQ9HC16 384 aaKnown RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 TAS2R14Q9NYV8 317 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 NXF1Q9UBU9 619 aaKnown RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 GJD2Q9UKL4 321 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 PACSIN2Q9UNF0 486 aaPredicted RBP7.28□□□□□ -1.24
MSH2-204ENST00000461394 CASP8AP2Q9UKL3 1982 aa7.28□□□□□ -1.24
MSH2-204ENST00000461394 UMODL1Q5DID0 1318 aa7.27□□□□□ -1.24
MSH2-204ENST00000461394 ABLIM1O14639 778 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 KCNK3O14649 394 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 TREHO43280 583 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 DUSP11O75319 330 aaKnown RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 TOMM70O94826 608 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PGK1P00558 417 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 NFICP08651 508 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 IQCF3P0C7M6 154 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 P4HA1P13674 534 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 CD19P15391 556 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 CHRNB2P17787 502 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 HOXD10P28358 340 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 CTGFP29279 349 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 NSFP46459 744 aaKnown RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 MCCD1P59942 119 aaPredicted RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 ZNF200P98182 395 aaPredicted RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 FMO1Q01740 532 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 SP3Q02447 781 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 CFAP221Q4G0U5 840 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 IER5LQ5T953 404 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 LIN9Q5TKA1 542 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 ACAD10Q6JQN1 1059 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 NOTUMQ6P988 496 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 SLC27A1Q6PCB7 646 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 RSPH3Q86UC2 560 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 ZNF677Q86XU0 584 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PASD1Q8IV76 773 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 RHOT2Q8IXI1 618 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 EFCAB13Q8IY85 973 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 TMEM192Q8IY95 271 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 ZNF710Q8N1W2 664 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 GPR161Q8N6U8 529 aaKnown RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 SLC35G2Q8TBE7 412 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 TRIB2Q92519 343 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 KAT2BQ92831 832 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 ARHGEF26Q96DR7 871 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 TRIM11Q96F44 468 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 RPGRIP1Q96KN7 1286 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 MMS19Q96T76 1030 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PCDHB18PQ96TA0 734 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 NIF3L1Q9GZT8 377 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PTPRHQ9HD43 1115 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 ACP6Q9NPH0 428 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 NOCTQ9UK39 431 aaKnown RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 NENFQ9UMX5 172 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 POLIQ9UNA4 740 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PIN4Q9Y237 131 aaKnown RBP7.27□□□□□ -1.25
MSH2-204ENST00000461394 NUB1Q9Y5A7 615 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PCDHB2Q9Y5E7 798 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 PCDHGC5Q9Y5F6 944 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 MROH7Q68CQ1 1323 aa7.27□□□□□ -1.25
MSH2-204ENST00000461394 MYADML2A6NDP7 307 aa7.26□□□□□ -1.25
MSH2-204ENST00000461394 SPTLC1O15269 473 aa7.26□□□□□ -1.25
MSH2-204ENST00000461394 TLR3O15455 904 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms