RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 OBSL1O75147 1896 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 GPR179Q6PRD1 2367 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 NPHP3-ACAD11A0A0J9YXS1 232 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 VWA3AA6NCI4 1184 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 ECI2O75521 394 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 PLA2G4BP0C869 781 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 MCL1Q07820 350 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 RABEP1Q15276 862 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 CTXN3Q4LDR2 81 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 TMEM119Q4V9L6 283 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 ARSHQ5FYA8 562 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 TPGS2Q68CL5 300 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 MAML2Q8IZL2 1156 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-216ENST00000461187 TMEM130Q8N3G9 435 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 DDX12PQ92771 950 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 CYP4F11Q9HBI6 524 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 KCND2Q9NZV8 630 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 TUBGCP4Q9UGJ1 667 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 INSL5Q9Y5Q6 135 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 ATG2BQ96BY7 2078 aa16.05■□□□□ 0.16
SMPD4-216ENST00000461187 CACNA1AO00555 2505 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 CLDN3O15551 220 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
SMPD4-216ENST00000461187 CXCL8P10145 99 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 MCM4P33991 863 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 NCKAP1LP55160 1127 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
SMPD4-216ENST00000461187 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
SMPD4-216ENST00000461187 TANGO2Q6ICL3 276 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 KCNG4Q8TDN1 519 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 KCNN1Q92952 543 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 TCEAL4Q96EI5 215 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 CORO1BQ9BR76 489 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 OSBPL6Q9BZF3 934 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
SMPD4-216ENST00000461187 TTC26A0AVF1 554 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 FAM170BA6NMN3 283 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 NRG2O14511 850 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-216ENST00000461187 CD2BP2O95400 341 aaKnown RBP16.03■□□□□ 0.16
SMPD4-216ENST00000461187 CD72P21854 359 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 FCARP24071 287 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 GJB2P29033 226 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 CCR2P41597 374 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 SPAG1Q07617 926 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 ADCY1Q08828 1119 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 UBXN2BQ14CS0 331 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 ZBTB6Q15916 424 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 ZNF280DQ6N043 979 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 ZC3H14Q6PJT7 736 aaKnown RBP16.03■□□□□ 0.16
SMPD4-216ENST00000461187 APPL2Q8NEU8 664 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 ELSPBP1Q96BH3 223 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 BCO2Q9BYV7 579 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 LTB4R2Q9NPC1 389 aa16.03■□□□□ 0.16
SMPD4-216ENST00000461187 AFF4Q9UHB7 1163 aaKnown RBP16.03■□□□□ 0.16
SMPD4-216ENST00000461187 SPAG17Q6Q759 2223 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 M0QZQ0 153 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 ZNF197O14709 1029 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 MICAL2O94851 1124 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 CLTAP09496 248 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 LRPAP1P30533 357 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 TNFSF9P41273 254 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMPD4-216ENST00000461187 TPRG1Q6ZUI0 275 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 HAUS6Q7Z4H7 955 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 LRRC15Q8TF66 581 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 CEP72Q9P209 647 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 LARSQ9P2J5 1176 aaKnown RBP16.02■□□□□ 0.16
SMPD4-216ENST00000461187 MAFFQ9ULX9 164 aa16.02■□□□□ 0.16
SMPD4-216ENST00000461187 DNAH14Q0VDD8 3507 aa16.02■□□□□ 0.15
SMPD4-216ENST00000461187 SHISA7A6NL88 538 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 H0YCG3 227 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 H3BQV1 296 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 SLC26A4O43511 780 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 FAM189A1O60320 539 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 MOSPD3O75425 235 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 OAZ2O95190 189 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 TARSP26639 723 aaKnown RBP16.01■□□□□ 0.15
SMPD4-216ENST00000461187 MARCKSP29966 332 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-216ENST00000461187 AARSP49588 968 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMPD4-216ENST00000461187 TWF1Q12792 350 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 FAM78AQ5JUQ0 283 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 PDZD4Q76G19 769 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-216ENST00000461187 HS6ST3Q8IZP7 471 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 ELMOD1Q8N336 334 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 BEST2Q8NFU1 509 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 CLDN23Q96B33 292 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 KIF12Q96FN5 646 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 BICD1Q96G01 975 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 ASB16Q96NS5 453 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 HEBP1Q9NRV9 189 aa16.01■□□□□ 0.15
SMPD4-216ENST00000461187 SPATA6Q9NWH7 488 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-216ENST00000461187 ODF2LQ9ULJ1 636 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms