RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 CHMP1BQ7LBR1 199 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF655Q8N720 491 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SUN3Q8TAQ9 357 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 THOC1Q96FV9 657 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OSBPL9Q96SU4 736 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IGFLR1Q9H665 355 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SP110Q9HB58 689 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DNPEPQ9ULA0 475 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PLA2G4CQ9UP65 541 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ESYT3A0FGR9 886 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FZD9O00144 591 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EIF3HO15372 352 aaKnown RBP eCLIP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IL18RAPO95256 599 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PMLP29590 882 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NSFP46459 744 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC11A2P49281 568 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SH3BGRP55822 239 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HDAC4P56524 1084 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AP2B1P63010 937 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CAPRIN2Q6IMN6 1127 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KLC3Q6P597 504 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EEPD1Q7L9B9 569 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 P2RX5Q93086 422 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VPS39Q96JC1 886 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 C11orf84Q9BUA3 381 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MKNK1Q9BUB5 465 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FUT8Q9BYC5 575 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MRPL47Q9HD33 250 aaKnown RBP6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TUFT1Q9NNX1 390 aa6.6□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PGRMC1O00264 195 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FOXN1O15353 648 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ORC4O43929 436 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BNIP3LO60238 219 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PDHA1P08559 390 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 H2AFZP0C0S5 128 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CDC25AP30304 524 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IRX1P78414 480 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FPGSQ05932 587 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CXCL9Q07325 125 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ANO4Q32M45 955 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF568Q3ZCX4 644 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RABGAP1LQ5R372 815 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM117BQ6P1L5 589 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 H2AFVQ71UI9 128 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LRRC8CQ8TDW0 803 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BSNDQ8WZ55 320 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ABTB1Q969K4 478 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 UROC1Q96N76 676 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SH3GL3Q99963 347 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TDRD3Q9H7E2 651 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VIPAS39Q9H9C1 493 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CD248Q9HCU0 757 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VCX3AQ9NNX9 186 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PDHXO00330 501 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TREHO43280 583 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MYL1P05976 194 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ASGR1P07306 291 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MMEP08473 750 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 XRCC5P13010 732 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GRIK1P39086 918 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 STAT1P42224 750 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ATN1P54259 1190 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IL9RQ01113 521 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPP2R2DQ66LE6 453 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SH2D3CQ8N5H7 860 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF473Q8WTR7 871 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ITFG2Q969R8 447 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DHTKD1Q96HY7 919 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DNAJC1Q96KC8 554 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IDI2Q9BXS1 227 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DEFB129Q9H1M3 183 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RAVER2Q9HCJ3 691 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 POLMQ9NP87 494 aaPredicted RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MRPL17Q9NRX2 175 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC45A1Q9Y2W3 748 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF185O15231 689 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ALDH2P05091 517 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OR1G1P47890 313 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MAGOHP61326 146 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IRX4P78413 519 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GLE1Q53GS7 698 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KRT39Q6A163 491 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NFRKBQ6P4R8 1299 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AVL9Q8NBF6 648 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LRRN4CLQ8ND94 238 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GPKOWQ92917 476 aaPredicted RBP eCLIP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MAGOHBQ96A72 148 aaKnown RBP6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NUDCD1Q96RS6 583 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FUCA2Q9BTY2 467 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 THAP9Q9H5L6 903 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PCDHB4Q9Y5E5 795 aa6.59□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TNKSO95271 1327 aa6.59□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TARSL2A2RTX5 802 aaKnown RBP6.59□□□□□ -1.36
HLA-DQA1-205ENST00000460633 TBXAS1P24557 533 aaPredicted RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms