RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TRIM49P0CI25 452 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 TRIM49CP0CI26 452 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 COL9A1P20849 921 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 RPL9P32969 192 aaKnown RBP8.19□□□□□ -1.1
ABCA4-202ENST00000460514 PNPLA4P41247 253 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
ABCA4-202ENST00000460514 RBP5P82980 135 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 MYL7Q01449 175 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 KCNH2Q12809 1159 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 TUSC3Q13454 348 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 BTG3Q14201 252 aaPredicted RBP8.19□□□□□ -1.1
ABCA4-202ENST00000460514 KRT31Q15323 416 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 PROX2Q3B8N5 592 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 GLRA4Q5JXX5 417 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 CLLU1OSQ5K130 101 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 RASIP1Q5U651 963 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 HERC6Q8IVU3 1022 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 SLC35C1Q96A29 364 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 ZFP42Q96MM3 310 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF560Q96MR9 790 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 CASD1Q96PB1 797 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 PPP1R10Q96QC0 940 aaKnown RBP8.19□□□□□ -1.1
ABCA4-202ENST00000460514 RAD9AQ99638 391 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 TMEM175Q9BSA9 504 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 MTMR12Q9C0I1 747 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 RBSNQ9H1K0 784 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 NDST4Q9H3R1 872 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 AAASQ9NRG9 546 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 DPP3Q9NY33 737 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 TAB2Q9NYJ8 693 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 RWDD3Q9Y3V2 267 aa8.19□□□□□ -1.1
ABCA4-202ENST00000460514 MEIS3P2A8K0S8 358 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 LGALS16A8MUM7 142 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 C4BPAP04003 597 aaKnown RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ALDH2P05091 517 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 KRT19P08727 400 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ATP1A3P13637 1013 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 P4HA1P13674 534 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 LAG3P18627 525 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 LRPAP1P30533 357 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ATICP31939 592 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 PIK3CAP42336 1068 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 GCLMP48507 274 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 FMO5P49326 533 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 UBASH3AP57075 661 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 DLG4P78352 724 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 HTRA4P83105 476 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 FANCCQ00597 558 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 SHHQ15465 462 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 RAB30Q15771 203 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ZBTB6Q15916 424 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ZACNQ401N2 412 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 PAN2Q504Q3 1202 aaKnown RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 SPOUT1Q5T280 376 aaKnown RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 FAM117BQ6P1L5 589 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 GBP6Q6ZN66 633 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 TRAPPC11Q7Z392 1133 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 GAS2L3Q86XJ1 694 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 EFCAB13Q8IY85 973 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 TDHQ8IZJ6 230 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 LRRC52Q8N7C0 313 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 GSTCDQ8NEC7 633 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 FBXL13Q8NEE6 735 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 TAF4BQ92750 862 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ZNF689Q96CS4 500 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 FAM81BQ96LP2 452 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ZMAT2Q96NC0 199 aaKnown RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 POP1Q99575 1024 aaKnown RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 VPS16Q9H269 839 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 HSD3B7Q9H2F3 369 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 MMRN2Q9H8L6 949 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 RNF19AQ9NV58 838 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 TBC1D13Q9NVG8 400 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 STK39Q9UEW8 545 aa8.18□□□□□ -1.1
ABCA4-202ENST00000460514 TDRD15B5MCY1 1934 aaKnown RBP8.18□□□□□ -1.1
ABCA4-202ENST00000460514 ANK1P16157 1881 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PDCD11Q14690 1871 aaKnown RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TRIP11Q15643 1979 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 A0A1B0GTH6 734 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 A0A1W2PPC1 479 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TRAPPC3O43617 180 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 ZC3H11AO75152 810 aaKnown RBP eCLIP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 ITGB3P05106 788 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PPM1AP35813 382 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 ALDH7A1P49419 539 aaKnown RBP8.17□□□□□ -1.1
ABCA4-202ENST00000460514 TAF6P49848 677 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 UBXN1Q04323 297 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 PPP3CAQ08209 521 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 DSC1Q08554 894 aa8.17□□□□□ -1.1
ABCA4-202ENST00000460514 NCOA4Q13772 614 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms