RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MYO15AQ9UKN7 3530 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 PRRG1O14668 218 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 OGTO15294 1046 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 XPOTO43592 962 aaKnown RBP24.8■■□□□ 1.56
PTPN4-207ENST00000460162 FAM189A1O60320 539 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 GFRA3O60609 400 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 CYP3A5P20815 502 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 NBL1P41271 181 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 TNFSF9P41273 254 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 PHLDB3Q6NSJ2 640 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 MAP4K3Q8IVH8 894 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 DDX12PQ92771 950 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 KIF12Q96FN5 646 aa24.8■■□□□ 1.56
PTPN4-207ENST00000460162 MRPS23Q9Y3D9 190 aaKnown RBP24.8■■□□□ 1.56
PTPN4-207ENST00000460162 RHOP08100 348 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 ARPP19P56211 112 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 ZBTB6Q15916 424 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 DTWD2Q8NBA8 298 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 FIZ1Q96SL8 496 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 MAFFQ9ULX9 164 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 INSL5Q9Y5Q6 135 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 TSC2P49815 1807 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 ANK1P16157 1881 aa24.79■■□□□ 1.56
PTPN4-207ENST00000460162 M0QZQ0 153 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 AARSP49588 968 aaKnown RBP eCLIP24.78■■□□□ 1.56
PTPN4-207ENST00000460162 SPAG1Q07617 926 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 PTPAQ15257 358 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 ENOX2Q16206 610 aaKnown RBP24.78■■□□□ 1.56
PTPN4-207ENST00000460162 ST13P5Q8NFI4 369 aaPredicted RBP24.78■■□□□ 1.56
PTPN4-207ENST00000460162 RPP25Q9BUL9 199 aaKnown RBP24.78■■□□□ 1.56
PTPN4-207ENST00000460162 ZHX3Q9H4I2 956 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 RPF1Q9H9Y2 349 aaKnown RBP24.78■■□□□ 1.56
PTPN4-207ENST00000460162 CYP4F11Q9HBI6 524 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 GDE1Q9NZC3 331 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 STK17AQ9UEE5 414 aa24.78■■□□□ 1.56
PTPN4-207ENST00000460162 ZFHX2Q9C0A1 2572 aaPredicted RBP24.78■■□□□ 1.56
PTPN4-207ENST00000460162 MIA3Q5JRA6 1907 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 A0A0B4J269 797 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 STK25O00506 426 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 ADRB2P07550 413 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 PTPN2P17706 415 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 GTF2BQ00403 316 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 YWHAHQ04917 246 aaPredicted RBP24.77■■□□□ 1.56
PTPN4-207ENST00000460162 SLC5A9Q2M3M2 681 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 CD302Q8IX05 232 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 ING5Q8WYH8 240 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 MSTO1Q9BUK6 570 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 OXCT2Q9BYC2 517 aaPredicted RBP24.77■■□□□ 1.56
PTPN4-207ENST00000460162 ST6GALNAC4Q9H4F1 302 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 AFF4Q9UHB7 1163 aaKnown RBP24.77■■□□□ 1.56
PTPN4-207ENST00000460162 CLIC4Q9Y696 253 aa24.77■■□□□ 1.56
PTPN4-207ENST00000460162 LACTBL1A8MY62 500 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 CPB1P15086 417 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 MARCKSP29966 332 aaPredicted RBP24.76■■□□□ 1.55
PTPN4-207ENST00000460162 DDIT3P35638 169 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 GPC5P78333 572 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 RESTQ13127 1097 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 ZBTB41Q5SVQ8 909 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 SLC39A4Q6P5W5 647 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 KRI1Q8N9T8 703 aaKnown RBP24.76■■□□□ 1.55
PTPN4-207ENST00000460162 SHDQ96IW2 340 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 CCDC39Q9UFE4 941 aa24.76■■□□□ 1.55
PTPN4-207ENST00000460162 FBXO2Q9UK22 296 aaPredicted RBP24.76■■□□□ 1.55
PTPN4-207ENST00000460162 OAZ2O95190 189 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 SEC24AO95486 1093 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 PFKPQ01813 784 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 ANGPT1Q15389 498 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 PRSS36Q5K4E3 855 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 ELMOD1Q8N336 334 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 EPSTI1Q96J88 318 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 KXD1Q9BQD3 176 aa24.75■■□□□ 1.55
PTPN4-207ENST00000460162 CPSF3Q9UKF6 684 aaKnown RBP24.75■■□□□ 1.55
PTPN4-207ENST00000460162 ECI2O75521 394 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 MICAL2O94851 1124 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 CEBPBP17676 345 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 SYT1P21579 422 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 NMT1P30419 496 aaKnown RBP24.74■■□□□ 1.55
PTPN4-207ENST00000460162 TXLNAP40222 546 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 STARD6P59095 220 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 ADCY1Q08828 1119 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 SPATA1Q5VX52 437 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 BEST2Q8NFU1 509 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 HVCN1Q96D96 273 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 INTS4Q96HW7 963 aaKnown RBP24.74■■□□□ 1.55
PTPN4-207ENST00000460162 CORO1BQ9BR76 489 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 SRPRBQ9Y5M8 271 aaKnown RBP24.74■■□□□ 1.55
PTPN4-207ENST00000460162 MORC2Q9Y6X9 1032 aaPredicted RBP24.74■■□□□ 1.55
PTPN4-207ENST00000460162 VPS13AQ96RL7 3174 aa24.74■■□□□ 1.55
PTPN4-207ENST00000460162 ZNF197O14709 1029 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 PAX3P23760 479 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 SPECC1Q5M775 1068 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 SLFN12LQ6IEE8 588 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 USP49Q70CQ1 688 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 PDZD4Q76G19 769 aaPredicted RBP24.73■■□□□ 1.55
PTPN4-207ENST00000460162 USP37Q86T82 979 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 TMEM130Q8N3G9 435 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 LEMD2Q8NC56 503 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 PJA1Q8NG27 643 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 DERAQ9Y315 318 aa24.73■■□□□ 1.55
PTPN4-207ENST00000460162 SIT1Q9Y3P8 196 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms