RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 GSTA5Q7RTV2 222 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 DDX27Q96GQ7 796 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 SCLT1Q96NL6 688 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 LRRC19Q9H756 370 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 VIMP08670 466 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 ATF7P17544 494 aaPredicted RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 ACO1P21399 889 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 PSMC4P43686 418 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 BAG6P46379 1132 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 CDR1P51861 262 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 CAPN12Q6ZSI9 719 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 MON1BQ7L1V2 547 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 LRRC71Q8N4P6 559 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 ANKRD42Q8N9B4 389 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 CDHR1Q96JP9 859 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 ADAM7Q9H2U9 754 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 AAASQ9NRG9 546 aa19.31■□□□□ 0.68
HPS3-202ENST00000460120 INTS9Q9NV88 658 aaKnown RBP19.31■□□□□ 0.68
HPS3-202ENST00000460120 KIAA1217Q5T5P2 1943 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 RARGP13631 454 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 ADCY2Q08462 1091 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 ENOSF1Q7L5Y1 443 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 NCAPG2Q86XI2 1143 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 CACNA2D3Q8IZS8 1091 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 DCLK3Q9C098 648 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 MTMR12Q9C0I1 747 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 PORCNQ9H237 461 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
HPS3-202ENST00000460120 COL11A1P12107 1806 aaPredicted RBP19.3■□□□□ 0.68
HPS3-202ENST00000460120 TP73O15350 636 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 GJB1P08034 283 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 ATF2P15336 505 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 UBA1P22314 1058 aaKnown RBP19.3■□□□□ 0.68
HPS3-202ENST00000460120 BRD2P25440 801 aaKnown RBP19.3■□□□□ 0.68
HPS3-202ENST00000460120 MAMLD1Q13495 774 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 NCOA4Q13772 614 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 AUHQ13825 339 aaKnown RBP19.3■□□□□ 0.68
HPS3-202ENST00000460120 CAPSQ13938 189 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 SLMAPQ14BN4 828 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 LY6KQ17RY6 165 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 LIN9Q5TKA1 542 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 CHMP6Q96FZ7 201 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 GGT7Q9UJ14 662 aa19.3■□□□□ 0.68
HPS3-202ENST00000460120 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
HPS3-202ENST00000460120 FDX1P10109 184 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 RPS12P25398 132 aaKnown RBP19.29■□□□□ 0.68
HPS3-202ENST00000460120 ORC1Q13415 861 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 TAB3Q8N5C8 712 aaPredicted RBP19.29■□□□□ 0.68
HPS3-202ENST00000460120 C9orf72Q96LT7 481 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 PPP1R16BQ96T49 567 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 KCNK9Q9NPC2 374 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 ANAPC5Q9UJX4 755 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 NFASCO94856 1347 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 PROSCO94903 275 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 WEE2P0C1S8 567 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 DRD4P21917 467 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 NOMO3P69849 1222 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 CENPCQ03188 943 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 FAM182AQ5T1J6 154 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 C6orf118Q5T5N4 469 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 ERMARDQ5T6L9 678 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 GKAP1Q5VSY0 366 aaPredicted RBP19.29■□□□□ 0.68
HPS3-202ENST00000460120 LRRC34Q8IZ02 419 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 DYDC1Q8WWB3 177 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 MRRFQ96E11 262 aaKnown RBP19.29■□□□□ 0.68
HPS3-202ENST00000460120 ADAM33Q9BZ11 813 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 FAM129AQ9BZQ8 928 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 CD2APQ9Y5K6 639 aa19.29■□□□□ 0.68
HPS3-202ENST00000460120 CYP1A1P04798 512 aaPredicted RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 CLTAP09496 248 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 ZSCAN5DPP0CG00 497 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 TMEM132AQ24JP5 1023 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 ABRAQ8N0Z2 381 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 PRPF31Q8WWY3 499 aaKnown RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 KLRG1Q96E93 195 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 PGM2Q96G03 612 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 SNF8Q96H20 258 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 JPH2Q9BR39 696 aaPredicted RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 CNOT10Q9H9A5 744 aaKnown RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 HGSO14964 777 aaPredicted RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 CYP4A22Q5TCH4 519 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 CYP4F22Q6NT55 531 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 ZNF365Q70YC5 407 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 GDAP1Q8TB36 358 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 TRAPPC12Q8WVT3 735 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 PCYT2Q99447 389 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 ELAC2Q9BQ52 826 aaKnown RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 OSBPL7Q9BZF2 842 aa19.28■□□□□ 0.68
HPS3-202ENST00000460120 DHX33Q9H6R0 707 aaKnown RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 MAFBQ9Y5Q3 323 aaPredicted RBP19.28■□□□□ 0.68
HPS3-202ENST00000460120 GSTTP1A0A1W2PQM5 241 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 ZC3H11AO75152 810 aaKnown RBP eCLIP19.27■□□□□ 0.68
HPS3-202ENST00000460120 GAS8O95995 478 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 PGK2P07205 417 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 ETS1P14921 441 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 NAMPTP43490 491 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 MMP13P45452 471 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 MYL6P60660 151 aa19.27■□□□□ 0.68
HPS3-202ENST00000460120 TFAMQ00059 246 aaKnown RBP19.27■□□□□ 0.68
HPS3-202ENST00000460120 C12orf50Q8NA57 414 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms