RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ALDH1A1P00352 501 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 PYGMP11217 842 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 DDIT3P35638 169 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 TAP1Q03518 808 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 BRDTQ58F21 947 aaPredicted RBP10.27□□□□□ -0.76
UFD1-205ENST00000459854 HP1BP3Q5SSJ5 553 aaPredicted RBP10.27□□□□□ -0.76
UFD1-205ENST00000459854 ODR4Q5SWX8 454 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 NFRKBQ6P4R8 1299 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 PATL1Q86TB9 770 aaKnown RBP10.27□□□□□ -0.76
UFD1-205ENST00000459854 MYCBPAPQ8TBZ2 947 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 PGBD1Q96JS3 809 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 SERPINB12Q96P63 405 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 NACC1Q96RE7 527 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 KIF17Q9P2E2 1029 aa10.27□□□□□ -0.76
UFD1-205ENST00000459854 SLC26A4O43511 780 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 PRPSAP2O60256 369 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 CALB1P05937 261 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 DDX5P17844 614 aaKnown RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 SAT1P21673 171 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 KCNB1Q14721 858 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 TRIP10Q15642 601 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 PTPROQ16827 1216 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 DEFB115Q30KQ5 88 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 RGMBQ6NW40 437 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 CRELD2Q6UXH1 353 aaPredicted RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 TRIM72Q6ZMU5 477 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 FAF2Q96CS3 445 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 C19orf60Q96EN9 201 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 LRRC1Q9BTT6 524 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 AMNQ9BXJ7 453 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 ZFYVE28Q9HCC9 887 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 SCN3BQ9NY72 215 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 SUPT3HO75486 399 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 SHMT1P34896 483 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 ATP6V1E1P36543 226 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 ST13P50502 369 aaKnown RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 MXI1P50539 228 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 BTNL9Q6UXG8 535 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 KCTD1Q719H9 257 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 TLK2Q86UE8 772 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 SH3GL1Q99961 368 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 TRIM45Q9H8W5 580 aaPredicted RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 CHMP2BQ9UQN3 213 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 A0A1W2PQJ5 194 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 NDUFA5Q16718 116 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 FAM83BQ5T0W9 1011 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 FAM102BQ5T8I3 360 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 CCDC137Q6PK04 289 aaKnown RBP10.27□□□□□ -0.77
UFD1-205ENST00000459854 GJA10Q969M2 543 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 ERP27Q96DN0 273 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 UBAP1Q9NZ09 502 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 AIPL1Q9NZN9 384 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
UFD1-205ENST00000459854 LRRC53A6NM62 1247 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 A8MXQ7 604 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 CLASP2O75122 1294 aaKnown RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 PHF2O75151 1096 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 ATP6V1G2O95670 118 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 BACE1P56817 501 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 PURAQ00577 322 aaKnown RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 PPIL2Q13356 520 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 KCTD2Q14681 263 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 TAF1CQ15572 869 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 CYFIP1Q7L576 1253 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 ENOSF1Q7L5Y1 443 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 REM2Q8IYK8 340 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 ATL2Q8NHH9 583 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 COG4Q9H9E3 785 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 UBE2TQ9NPD8 197 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 PSMC3IPQ9P2W1 217 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 SYNPO2Q9UMS6 1093 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 RPS6KA5O75582 802 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 OATP04181 439 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 ROR2Q01974 943 aaKnown RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 GSPT2Q8IYD1 628 aaKnown RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 MCUQ8NE86 351 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 NCLNQ969V3 563 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 SLC13A4Q9UKG4 626 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 TTLL3Q9Y4R7 772 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 ANKRD31Q8N7Z5 1873 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 ALAS1P13196 640 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 COG2Q14746 738 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 PREPLQ4J6C6 727 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 NSMFQ6X4W1 530 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 CYB5R4Q7L1T6 521 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 PCYOX1LQ8NBM8 494 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 TNIP2Q8NFZ5 429 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 KLRG1Q96E93 195 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 MMS19Q96T76 1030 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 COQ7Q99807 217 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 MRPL1Q9BYD6 325 aaKnown RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 RPAP3Q9H6T3 665 aaPredicted RBP10.26□□□□□ -0.77
UFD1-205ENST00000459854 FBXO40Q9UH90 709 aa10.26□□□□□ -0.77
UFD1-205ENST00000459854 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms