RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 USP6NLQ92738 828 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 LZTS1Q9Y250 596 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 GYG2O15488 501 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 DRP2Q13474 957 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 CASC4Q6P4E1 433 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 DNAAF5Q86Y56 855 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 NSMCE1Q8WV22 266 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 APOL6Q9BWW8 343 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 ISCUQ9H1K1 167 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 KCTD10Q9H3F6 313 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 MLXIPLQ9NP71 852 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 H7C0C1 242 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 KRT3P12035 628 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 COMTP21964 271 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 PSMA2P25787 234 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 ATP5OP48047 213 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 AP3M2P53677 418 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 C16orf87Q6PH81 154 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 DDX42Q86XP3 938 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 TRIM42Q8IWZ5 723 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 RHOT1Q8IXI2 618 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 SPATA33Q96N06 139 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 ZIM3Q96PE6 472 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 CARD9Q9H257 536 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 VPS33BQ9H267 617 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 GGT7Q9UJ14 662 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 UBR2Q8IWV8 1755 aa11.94□□□□□ -0.5
CSPG4P10-201ENST00000456932 PHF2O75151 1096 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 EEF1DP29692 281 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PHKA2P46019 1235 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 MMP14P50281 582 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SESTD1Q86VW0 696 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 RNF149Q8NC42 400 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CHST13Q8NET6 341 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SNRNP27Q8WVK2 155 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 C1orf54Q8WWF1 131 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PRPF31Q8WWY3 499 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CHMP6Q96FZ7 201 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 DNAJC18Q9H819 358 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ZFYVE28Q9HCC9 887 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 A0A0A6YYK5 440 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 TJP3O95049 919 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 HLA-DRAP01903 254 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 MAPTP10636 758 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 TTLL4Q14679 1199 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ARSHQ5FYA8 562 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SH3BP5LQ7L8J4 393 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SEPT1Q8WYJ6 367 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 MMP19Q99542 508 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 EPN3Q9H201 632 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ASTN1O14525 1302 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 EXTL3O43909 919 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SPAG7O75391 227 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 SSTR3P32745 418 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 DUOXA2Q1HG44 320 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 C9orf131Q5VYM1 1079 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CASKIN2Q8WXE0 1202 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 DACT3Q96B18 629 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 HEXIM2Q96MH2 286 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 LBHD1Q9BQE6 289 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 KRT14P02533 472 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PRKCBP05771 671 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 PAX7P23759 505 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 OR6B2Q6IFH4 312 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ZNF513Q8N8E2 541 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CPA5Q8WXQ8 436 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 FGFBP2Q9BYJ0 223 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 MTIF3Q9H2K0 278 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ZWILCHQ9H900 591 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 BAG5Q9UL15 447 aa11.93□□□□□ -0.5
CSPG4P10-201ENST00000456932 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 MCF2LO15068 1137 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 RFC5P40937 340 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 AMPD2Q01433 879 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 SLC20A2Q08357 652 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 TMEM154Q6P9G4 183 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 LRRC31Q6UY01 552 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 KCTD6Q8NC69 237 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 OLFM3Q96PB7 478 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 TTC1Q99614 292 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 MED10Q9BTT4 135 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 EFHD1Q9BUP0 239 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 GANQ9H2C0 597 aa11.92□□□□□ -0.5
CSPG4P10-201ENST00000456932 OSGEPQ9NPF4 335 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms