RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 MRPL4Q9BYD3 311 aaKnown RBP15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 TMEM134Q9H6X4 195 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 C8orf33Q9H7E9 229 aaPredicted RBP15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 C17orf75Q9HAS0 396 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 PTPRHQ9HD43 1115 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 ASAH2Q9NR71 780 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 CNTN3Q9P232 1028 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 FBXL5Q9UKA1 691 aa15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 NDRG2Q9UN36 371 aaKnown RBP15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
LYSMD3-202ENST00000453259 EDN1P05305 212 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 OR52Z1P0C646 297 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 LIG1P18858 919 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 GDI1P31150 447 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 MCM7P33993 719 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 BRCC3P46736 316 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 GRM2Q14416 872 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 ZNF568Q3ZCX4 644 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 DGKKQ5KSL6 1271 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 VITQ6UXI7 678 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 CDT1Q9H211 546 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 TMEM60Q9H2L4 133 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 LMAN1LQ9HAT1 526 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 GOLGA2P5Q9HBQ8 144 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 PARD6AQ9NPB6 346 aa15.65■□□□□ 0.1
LYSMD3-202ENST00000453259 A0A087WWV3 80 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 I3L4J1 428 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 ARNTLO00327 626 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 WNT7AO00755 349 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 CHADO15335 359 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 CHRNB1P11230 501 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 SOX4Q06945 474 aaPredicted RBP15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 FCHO2Q0JRZ9 810 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 SPEM2Q0P670 501 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 PTGDRQ13258 359 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 DMP1Q13316 513 aaPredicted RBP15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 CTXN3Q4LDR2 81 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 LONP2Q86WA8 852 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 SYNPOQ8N3V7 929 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 NSUN7Q8NE18 718 aaKnown RBP15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 BEST2Q8NFU1 509 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 ZSCAN18Q8TBC5 510 aaPredicted RBP15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 CSGALNACT1Q8TDX6 532 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 TCEAL4Q96EI5 215 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 DRC1Q96MC2 740 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 ACAP3Q96P50 834 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 ACO2Q99798 780 aaKnown RBP15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 SEMA4GQ9NTN9 838 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 ARHGAP28Q9P2N2 729 aa15.64■□□□□ 0.09
LYSMD3-202ENST00000453259 DCDC2BA2VCK2 349 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 SEC24AO95486 1093 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 FGF19O95750 216 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 PROZP22891 400 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 CCR2P41597 374 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 TRAPPC10P48553 1259 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 SIM2Q14190 667 aaPredicted RBP15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 PDIA5Q14554 519 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 POTEHQ6S545 545 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 PRR23CQ6ZRP0 262 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 RALGPS2Q86X27 583 aaPredicted RBP15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 YAF2Q8IY57 180 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 KIFC3Q9BVG8 833 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 TIPINQ9BVW5 301 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 BHMT2Q9H2M3 363 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 OBP2AQ9NY56 170 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 PCDHB8Q9UN66 801 aa15.63■□□□□ 0.09
LYSMD3-202ENST00000453259 SPTBN2O15020 2390 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 OAZ2O95190 189 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 CPB1P15086 417 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 PAX3P23760 479 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 IGFBP6P24592 240 aaPredicted RBP15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 MCM4P33991 863 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 NPTX2P47972 431 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 LIMK1P53667 647 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 ARPP19P56211 112 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 TWF1Q12792 350 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 ME3Q16798 604 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 ST3GAL2Q16842 350 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 PPM1JQ5JR12 505 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 MPZL3Q6UWV2 235 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 PRR23BQ6ZRT6 265 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 ZMAT2Q96NC0 199 aaKnown RBP15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 TSPAN18Q96SJ8 248 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 FOXP1Q9H334 677 aaPredicted RBP15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 FOXD4L1Q9NU39 408 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 CEP72Q9P209 647 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 HSFX1Q9UBD0 423 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 USP20Q9Y2K6 914 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 ASB3Q9Y575 518 aa15.62■□□□□ 0.09
LYSMD3-202ENST00000453259 TICRRQ7Z2Z1 1910 aa15.61■□□□□ 0.09
LYSMD3-202ENST00000453259 CCDC163A0A0D9SF12 145 aa15.61■□□□□ 0.09
LYSMD3-202ENST00000453259 CCDC169A6NNP5 214 aa15.61■□□□□ 0.09
LYSMD3-202ENST00000453259 M0QZQ0 153 aa15.61■□□□□ 0.09
LYSMD3-202ENST00000453259 MOSPD3O75425 235 aa15.61■□□□□ 0.09
LYSMD3-202ENST00000453259 KRT37O76014 449 aa15.61■□□□□ 0.09
LYSMD3-202ENST00000453259 CCNE1P24864 410 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms