RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 MRPL4Q9BYD3 311 aaKnown RBP10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 EPC1Q9H2F5 836 aa10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 LMAN1LQ9HAT1 526 aa10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 LRWD1Q9UFC0 647 aa10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 TNFSF13BQ9Y275 285 aa10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 INSL5Q9Y5Q6 135 aa10.58□□□□□ -0.72
SPTLC3-204ENST00000450297 VPS13AQ96RL7 3174 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ARHGEF37A1IGU5 675 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ZNF263O14978 683 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 CPB1P15086 417 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ATF2P15336 505 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 GJA1P17302 382 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 VIPR2P41587 438 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 MATR3P43243 847 aaKnown RBP eCLIP10.57□□□□□ -0.729e-11■■■■■ 28.9
SPTLC3-204ENST00000450297 NEK4P51957 841 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 KPNA1P52294 538 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ANAPC15P60006 121 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 SOX4Q06945 474 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 SPEM2Q0P670 501 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 TWF1Q12792 350 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 DMP1Q13316 513 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ZRSR1Q15695 479 aaKnown RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 TTC38Q5R3I4 469 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 APPL2Q8NEU8 664 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ZSCAN18Q8TBC5 510 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 CSGALNACT1Q8TDX6 532 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 SMARCD2Q92925 531 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 C18orf25Q96B23 403 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 CNTNAP3BQ96NU0 1288 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 TARS2Q9BW92 718 aaKnown RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 FAM126AQ9BYI3 521 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 CNTNAP3Q9BZ76 1288 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 CDT1Q9H211 546 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 KMT5AQ9NQR1 393 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 AVENQ9NQS1 362 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 PRMT8Q9NR22 394 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 ASAH2Q9NR71 780 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 DDX19AQ9NUU7 478 aaKnown RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 NOL7Q9UMY1 257 aaKnown RBP10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 PIAS3Q9Y6X2 628 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 COL4A3Q01955 1670 aa10.57□□□□□ -0.72
SPTLC3-204ENST00000450297 SYN3O14994 580 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 LILRB5O75023 590 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ABLIM3O94929 683 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 MCF2P10911 925 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 PSMC3P17980 439 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 FCARP24071 287 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 NPTX2P47972 431 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 CXCL12P48061 93 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 CCR3P51677 355 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 STRN3Q13033 797 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 TPGS2Q68CL5 300 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ZNF280DQ6N043 979 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 GPIHBP1Q8IV16 184 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 TCEAL8Q8IYN2 117 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 FAM200AQ8TCP9 573 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 SNX29Q8TEQ0 813 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ZSWIM3Q96MP5 696 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ZMAT2Q96NC0 199 aaKnown RBP10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ASB16Q96NS5 453 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ACO2Q99798 780 aaKnown RBP10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 RAB34Q9BZG1 259 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 ANKFY1Q9P2R3 1169 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 DNM3Q9UQ16 869 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 CACNA1AO00555 2505 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 TDRD15B5MCY1 1934 aaKnown RBP10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 PHLPP2Q6ZVD8 1323 aa10.56□□□□□ -0.72
SPTLC3-204ENST00000450297 SLC16A4O15374 487 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 HIP1RO75146 1068 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 MICAL2O94851 1124 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 KCNE1P15382 129 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 MUTP22033 750 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 CCNE1P24864 410 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 CCR2P41597 374 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 ORC2Q13416 577 aaPredicted RBP10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 FZD5Q13467 585 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 SIM2Q14190 667 aaPredicted RBP10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 TEAD2Q15562 447 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 ECM1Q16610 540 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 SEZ6Q53EL9 994 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 KRT79Q5XKE5 535 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 HEATR6Q6AI08 1181 aaKnown RBP10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 LAIR1Q6GTX8 287 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 MPZL3Q6UWV2 235 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 VITQ6UXI7 678 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 USP37Q86T82 979 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 CELF5Q8N6W0 485 aaKnown RBP10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 FAM184AQ8NB25 1140 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 LEMD2Q8NC56 503 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 TTC8Q8TAM2 541 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 DEPDC1BQ8WUY9 529 aa10.55□□□□□ -0.72
SPTLC3-204ENST00000450297 CHAMP1Q96JM3 812 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms