RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
DDX39B-211ENST00000449757 ZNF512Q96ME7 567 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-211ENST00000449757 ASB16Q96NS5 453 aa11.28□□□□□ -0.6
DDX39B-211ENST00000449757 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
DDX39B-211ENST00000449757 FAM126AQ9BYI3 521 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-211ENST00000449757 CHRDQ9H2X0 955 aa11.28□□□□□ -0.6
DDX39B-211ENST00000449757 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-211ENST00000449757 DDX19AQ9NUU7 478 aaKnown RBP11.28□□□□□ -0.6
DDX39B-211ENST00000449757 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
DDX39B-211ENST00000449757 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
DDX39B-211ENST00000449757 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
DDX39B-211ENST00000449757 ZNF263O14978 683 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 HIP1RO75146 1068 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ABLIM3O94929 683 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ATF2P15336 505 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 PSMC3P17980 439 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 VIPR2P41587 438 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 CCR3P51677 355 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 NBR1Q14596 966 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ECM1Q16610 540 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 POTEHQ6S545 545 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 VITQ6UXI7 678 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-211ENST00000449757 TCEAL8Q8IYN2 117 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ZSCAN18Q8TBC5 510 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-211ENST00000449757 FAM200AQ8TCP9 573 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 CSGALNACT1Q8TDX6 532 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 SMARCD2Q92925 531 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ACAP3Q96P50 834 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ACO2Q99798 780 aaKnown RBP11.27□□□□□ -0.61
DDX39B-211ENST00000449757 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 TARS2Q9BW92 718 aaKnown RBP11.27□□□□□ -0.61
DDX39B-211ENST00000449757 LMAN1LQ9HAT1 526 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ZNF334Q9HCZ1 680 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-211ENST00000449757 PARD6AQ9NPB6 346 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 LRWD1Q9UFC0 647 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 NOL7Q9UMY1 257 aaKnown RBP11.27□□□□□ -0.61
DDX39B-211ENST00000449757 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
DDX39B-211ENST00000449757 ATG2BQ96BY7 2078 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 TSC2P49815 1807 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 NRG2O14511 850 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 MCF2P10911 925 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 MUTP22033 750 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 CCNE1P24864 410 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 NPTX2P47972 431 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 NEK4P51957 841 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 KPNA1P52294 538 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 SATB1Q01826 763 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 FZD5Q13467 585 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 TEAD2Q15562 447 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 ZRSR1Q15695 479 aaKnown RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 TPGS2Q68CL5 300 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 LAIR1Q6GTX8 287 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 APPL2Q8NEU8 664 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 ZSWIM3Q96MP5 696 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 PGLYRP2Q96PD5 576 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 IER2Q9BTL4 223 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 CNTN3Q9P232 1028 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 AFF4Q9UHB7 1163 aaKnown RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 YIPF1Q9Y548 306 aa11.26□□□□□ -0.61
DDX39B-211ENST00000449757 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
DDX39B-211ENST00000449757 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 GREB1Q4ZG55 1949 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
DDX39B-211ENST00000449757 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 HEPACAM2A8MVW5 462 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 E9PMD0 336 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 SLC16A4O15374 487 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 KRT37O76014 449 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
DDX39B-211ENST00000449757 SOX9P48436 509 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 STRN3Q13033 797 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 SIM2Q14190 667 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-211ENST00000449757 LRRC32Q14392 662 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 NOLC1Q14978 699 aaKnown RBP eCLIP11.25□□□□□ -0.611e-323■■■■□ 24.5
DDX39B-211ENST00000449757 SEZ6Q53EL9 994 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 HEATR6Q6AI08 1181 aaKnown RBP11.25□□□□□ -0.61
DDX39B-211ENST00000449757 ALKAL1Q6UXT8 129 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 TTC8Q8TAM2 541 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 DDX12PQ92771 950 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 NELL1Q92832 810 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 BICD1Q96G01 975 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 SUSD3Q96L08 255 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 DRC1Q96MC2 740 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 RUSC1Q9BVN2 902 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 CEP72Q9P209 647 aa11.25□□□□□ -0.61
DDX39B-211ENST00000449757 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms