RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 PARP2Q9UGN5 583 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CLSTN1O94985 981 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ITGB3P05106 788 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SKIP12755 728 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ITGA4P13612 1032 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 HNRNPH3P31942 346 aaKnown RBP13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MLH1P40692 756 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FPGSQ05932 587 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MEA1Q16626 185 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PLEKHG4Q58EX7 1191 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GLRA4Q5JXX5 417 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ALKAL1Q6UXT8 129 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TET1Q8NFU7 2136 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 APBB2Q92870 758 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZMAT2Q96NC0 199 aaKnown RBP13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TSPAN18Q96SJ8 248 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PI4K2AQ9BTU6 479 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TUBGCP4Q9UGJ1 667 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SIX4Q9UIU6 781 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 HCN4Q9Y3Q4 1203 aa13.68□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PTPRSQ13332 1948 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MEIS3P2A8K0S8 358 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ARHGAP6O43182 974 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZNF623O75123 536 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CXCL10P02778 98 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SKILP12757 684 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KCNE1P15382 129 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RAG1P15918 1043 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GCNT1Q02742 428 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TRPC3Q13507 836 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GPNMBQ14956 572 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ASIC2Q16515 512 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZNF699Q32M78 642 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SFMBT2Q5VUG0 894 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SPOPLQ6IQ16 392 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 WDR59Q6PJI9 974 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CYP26C1Q6V0L0 522 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FAM43BQ6ZT52 329 aaPredicted RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MRPL10Q7Z7H8 261 aaKnown RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SEPT8Q92599 483 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SYN2Q92777 582 aaPredicted RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 LPPQ93052 612 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SCLYQ96I15 445 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GPR88Q9GZN0 384 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RGS18Q9NS28 235 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TMEM39AQ9NV64 488 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 DPP3Q9NY33 737 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PYCARDQ9ULZ3 195 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SCN1AP35498 2009 aa13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PTGESO14684 152 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KRT19P08727 400 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PNMA6AP0CW24 399 aaPredicted RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 POLR2BP30876 1174 aaKnown RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CYP2C18P33260 490 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KCNJ6P48051 423 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MFAP3P55082 362 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CCL23P55773 120 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MYL6P60660 151 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 DRAP1Q14919 205 aaPredicted RBP13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ENOSF1Q7L5Y1 443 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ECHDC2Q86YB7 292 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FMNL3Q8IVF7 1028 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TMEM130Q8N3G9 435 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CXorf38Q8TB03 319 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TAF4BQ92750 862 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KAT5Q92993 513 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ELMO3Q96BJ8 720 aa13.66□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PGBD4Q96DM1 585 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms